BLASTX nr result

ID: Cimicifuga21_contig00039953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039953
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147798.1| PREDICTED: exocyst complex component SEC3A-l...   180   9e-44
ref|XP_003634363.1| PREDICTED: exocyst complex component SEC3A i...   178   5e-43
ref|XP_002283704.1| PREDICTED: exocyst complex component SEC3A i...   178   5e-43
ref|XP_002891366.1| hypothetical protein ARALYDRAFT_473899 [Arab...   175   3e-42
ref|NP_175186.2| exocyst complex component sec3A [Arabidopsis th...   175   4e-42

>ref|XP_004147798.1| PREDICTED: exocyst complex component SEC3A-like [Cucumis sativus]
          Length = 883

 Score =  180 bits (457), Expect = 9e-44
 Identities = 88/108 (81%), Positives = 97/108 (89%)
 Frame = +3

Query: 3   SFMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKEILDRLPKVVGIDIVEMALWA 182
           +F LGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICK++L+RLPKVVGID+VEMALWA
Sbjct: 107 TFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLERLPKVVGIDVVEMALWA 166

Query: 183 KENTTSVTIQAKPRDGPVASIVTEDDLKVTVEKDLVSQAEEEDMEALL 326
           KENT +V  Q   +DGP  + VTE DLKVTVEK+LVSQAEEEDMEALL
Sbjct: 167 KENTPTVPTQRSHQDGPAVARVTESDLKVTVEKELVSQAEEEDMEALL 214


>ref|XP_003634363.1| PREDICTED: exocyst complex component SEC3A isoform 2 [Vitis
           vinifera]
          Length = 887

 Score =  178 bits (451), Expect = 5e-43
 Identities = 85/108 (78%), Positives = 98/108 (90%)
 Frame = +3

Query: 3   SFMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKEILDRLPKVVGIDIVEMALWA 182
           +FMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICK++L RLPKVVGID+VEMALWA
Sbjct: 106 TFMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWA 165

Query: 183 KENTTSVTIQAKPRDGPVASIVTEDDLKVTVEKDLVSQAEEEDMEALL 326
           KEN  +VT Q    DGP+ ++VTE DLKV+VE++LV+QAEE+DMEALL
Sbjct: 166 KENKPTVTAQGNLHDGPIPAMVTETDLKVSVERELVTQAEEDDMEALL 213


>ref|XP_002283704.1| PREDICTED: exocyst complex component SEC3A isoform 1 [Vitis
           vinifera] gi|302142418|emb|CBI19621.3| unnamed protein
           product [Vitis vinifera]
          Length = 886

 Score =  178 bits (451), Expect = 5e-43
 Identities = 85/108 (78%), Positives = 98/108 (90%)
 Frame = +3

Query: 3   SFMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKEILDRLPKVVGIDIVEMALWA 182
           +FMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICK++L RLPKVVGID+VEMALWA
Sbjct: 106 TFMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWA 165

Query: 183 KENTTSVTIQAKPRDGPVASIVTEDDLKVTVEKDLVSQAEEEDMEALL 326
           KEN  +VT Q    DGP+ ++VTE DLKV+VE++LV+QAEE+DMEALL
Sbjct: 166 KENKPTVTAQGNLHDGPIPAMVTETDLKVSVERELVTQAEEDDMEALL 213


>ref|XP_002891366.1| hypothetical protein ARALYDRAFT_473899 [Arabidopsis lyrata subsp.
           lyrata] gi|297337208|gb|EFH67625.1| hypothetical protein
           ARALYDRAFT_473899 [Arabidopsis lyrata subsp. lyrata]
          Length = 887

 Score =  175 bits (444), Expect = 3e-42
 Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   SFMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKEILDRLPKVVGIDIVEMALWA 182
           +F LGFDNLRSQSVAPPQWTMRN DDRNRLL+CILNICK++L RLPKVVGIDIVEMALWA
Sbjct: 106 TFTLGFDNLRSQSVAPPQWTMRNTDDRNRLLVCILNICKDVLGRLPKVVGIDIVEMALWA 165

Query: 183 KENTTSVTIQAKPRD-GPVASIVTEDDLKVTVEKDLVSQAEEEDMEALL 326
           K+NT  VT Q    D GPVA  VTE DLKVTVEK+LVSQAEEEDMEALL
Sbjct: 166 KDNTPVVTTQRSTEDGGPVAETVTESDLKVTVEKELVSQAEEEDMEALL 214


>ref|NP_175186.2| exocyst complex component sec3A [Arabidopsis thaliana]
           gi|75213194|sp|Q9SX85.1|SEC3A_ARATH RecName:
           Full=Exocyst complex component SEC3A
           gi|5668806|gb|AAD46032.1|AC007519_17 Strong similarity
           to F16N3.17 from Arabidopsis thalian BAC gb|AC007519
           [Arabidopsis thaliana] gi|332194063|gb|AEE32184.1|
           exocyst complex component sec3A [Arabidopsis thaliana]
          Length = 887

 Score =  175 bits (443), Expect = 4e-42
 Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   SFMLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKEILDRLPKVVGIDIVEMALWA 182
           +F LGFDNLRSQSVAPPQWTMRN DDRNRLL+CILNICK++L RLPKVVGIDIVEMALWA
Sbjct: 106 TFTLGFDNLRSQSVAPPQWTMRNTDDRNRLLVCILNICKDVLGRLPKVVGIDIVEMALWA 165

Query: 183 KENTTSVTIQAKPRDG-PVASIVTEDDLKVTVEKDLVSQAEEEDMEALL 326
           K+NT  VT Q    DG PVA  VTE DLKVTVEK+LVSQAEEEDMEALL
Sbjct: 166 KDNTPVVTTQRSTEDGEPVAESVTESDLKVTVEKELVSQAEEEDMEALL 214


Top