BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039919
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA85375.1| apocytochrome b6 (alt.) [Oryza sativa] gi|226762|...   252   3e-65
ref|NP_039415.1| cytochrome b6 [Oryza sativa Japonica Group] gi|...   252   3e-65
gb|ACT79803.1| petB [Fuchsia thymifolia]                              252   3e-65
gb|ACT79789.1| petB [Fuchsia pachyrrhiza]                             252   3e-65
gb|ACT79731.1| petB [Circaea canadensis subsp. quadrisulcata]         252   3e-65

>gb|AAA85375.1| apocytochrome b6 (alt.) [Oryza sativa] gi|226762|prf||1604469A
           cytochrome b6
          Length = 232

 Score =  252 bits (643), Expect = 3e-65
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3   ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 182
           ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK
Sbjct: 107 ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 166

Query: 183 IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 362
           IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ
Sbjct: 167 IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 226

Query: 363 GISGPL 380
           GISGPL
Sbjct: 227 GISGPL 232


>ref|NP_039415.1| cytochrome b6 [Oryza sativa Japonica Group]
           gi|50234001|ref|YP_052779.1| cytochrome b6 [Oryza
           nivara] gi|374249296|ref|YP_005088039.1| petB gene
           product [Leersia tisserantii]
           gi|374249649|ref|YP_005089176.1| petB gene product
           [Rhynchoryza subulata] gi|117818|sp|P12123.1|CYB6_ORYSJ
           RecName: Full=Cytochrome b6
           gi|38605633|sp|P60161.1|CYB6_HORVU RecName:
           Full=Cytochrome b6 gi|38605634|sp|P60162.1|CYB6_WHEAT
           RecName: Full=Cytochrome b6
           gi|61212574|sp|Q6ENE4.1|CYB6_ORYNI RecName:
           Full=Cytochrome b6 gi|148872480|sp|P0C316.1|CYB6_ORYSI
           RecName: Full=Cytochrome b6
           gi|148897907|sp|P0C315.1|CYB6_ORYSA RecName:
           Full=Cytochrome b6 gi|343209|gb|AAA85374.1|
           apocytochrome b6 [Oryza sativa]
           gi|669082|emb|CAA33977.1| cytochrome B6 [Oryza sativa
           Japonica Group] gi|49615025|dbj|BAD26808.1| cytochrome
           b6 [Oryza nivara] gi|346228333|gb|AEO21207.1| cytochrome
           b6 [Leersia tisserantii] gi|346228501|gb|AEO21373.1|
           cytochrome b6 [Rhynchoryza subulata]
           gi|353685083|gb|AER12848.1| cytochrome b6 (chloroplast)
           [Oryza sativa Indica Group] gi|353685171|gb|AER12935.1|
           cytochrome b6 (chloroplast) [Oryza sativa Indica Group]
           gi|226638|prf||1603356BM cytochrome b6
          Length = 215

 Score =  252 bits (643), Expect = 3e-65
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3   ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 182
           ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK
Sbjct: 90  ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 149

Query: 183 IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 362
           IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ
Sbjct: 150 IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 209

Query: 363 GISGPL 380
           GISGPL
Sbjct: 210 GISGPL 215


>gb|ACT79803.1| petB [Fuchsia thymifolia]
          Length = 138

 Score =  252 bits (643), Expect = 3e-65
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3   ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 182
           ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK
Sbjct: 13  ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 72

Query: 183 IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 362
           IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ
Sbjct: 73  IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 132

Query: 363 GISGPL 380
           GISGPL
Sbjct: 133 GISGPL 138


>gb|ACT79789.1| petB [Fuchsia pachyrrhiza]
          Length = 138

 Score =  252 bits (643), Expect = 3e-65
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3   ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 182
           ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK
Sbjct: 13  ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 72

Query: 183 IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 362
           IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ
Sbjct: 73  IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 132

Query: 363 GISGPL 380
           GISGPL
Sbjct: 133 GISGPL 138


>gb|ACT79731.1| petB [Circaea canadensis subsp. quadrisulcata]
          Length = 138

 Score =  252 bits (643), Expect = 3e-65
 Identities = 126/126 (100%), Positives = 126/126 (100%)
 Frame = +3

Query: 3   ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 182
           ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK
Sbjct: 13  ASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVK 72

Query: 183 IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 362
           IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ
Sbjct: 73  IVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQ 132

Query: 363 GISGPL 380
           GISGPL
Sbjct: 133 GISGPL 138