BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039869
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   113   5e-28
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   111   5e-27
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   111   5e-27
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   107   3e-26
emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]   108   3e-26

>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  113 bits (282), Expect(2) = 5e-28
 Identities = 50/74 (67%), Positives = 63/74 (85%)
 Frame = +3

Query: 66  ATVSSKIDIHSGFHQVHMHPGGEQKTSFKTKDGLYEWLVVPFGLSNASSTFMHLMTTVLR 245
           AT+ SKID+ SG+HQ+ + PG E KT+FKTKDGLYEW+V+PFGL+NA STFM +MT VLR
Sbjct: 32  ATIFSKIDLKSGYHQIRIRPGDEWKTAFKTKDGLYEWMVMPFGLTNAPSTFMRVMTQVLR 91

Query: 246 DYLAKFVVVYFDDI 287
            ++ KF+VVYFDDI
Sbjct: 92  PFMGKFLVVYFDDI 105



 Score = 36.2 bits (82), Expect(2) = 5e-28
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = +2

Query: 2  KITVKYKFLIPRLNDLLDCLHGHSV 76
          KITVKY+F IPRL+D+LD + G ++
Sbjct: 10 KITVKYRFPIPRLDDMLDMMSGATI 34


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  111 bits (278), Expect(2) = 5e-27
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = +3

Query: 66  ATVSSKIDIHSGFHQVHMHPGGEQKTSFKTKDGLYEWLVVPFGLSNASSTFMHLMTTVLR 245
           + + SKID+ SG+HQ+ + PG E KTSFKTKDGLYEWLV+PFGL+NA STFM +MT VL+
Sbjct: 706 SVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLK 765

Query: 246 DYLAKFVVVYFDDI 287
            ++ +FVVVYFDDI
Sbjct: 766 PFIGRFVVVYFDDI 779



 Score = 34.3 bits (77), Expect(2) = 5e-27
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   KITVKYKFLIPRLNDLLDCLHG 67
           KIT+KY+F IPRL+D+LD + G
Sbjct: 684 KITIKYRFPIPRLDDMLDMMVG 705


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  111 bits (278), Expect(2) = 5e-27
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = +3

Query: 66  ATVSSKIDIHSGFHQVHMHPGGEQKTSFKTKDGLYEWLVVPFGLSNASSTFMHLMTTVLR 245
           + + SKID+ SG+HQ+ + PG E KTSFKTKDGLYEWLV+PFGL+NA STFM +MT VL+
Sbjct: 665 SVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLK 724

Query: 246 DYLAKFVVVYFDDI 287
            ++ +FVVVYFDDI
Sbjct: 725 PFIGRFVVVYFDDI 738



 Score = 34.3 bits (77), Expect(2) = 5e-27
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   KITVKYKFLIPRLNDLLDCLHG 67
           KIT+KY+F IPRL+D+LD + G
Sbjct: 643 KITIKYRFPIPRLDDMLDMMVG 664


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  107 bits (267), Expect(2) = 3e-26
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = +3

Query: 66  ATVSSKIDIHSGFHQVHMHPGGEQKTSFKTKDGLYEWLVVPFGLSNASSTFMHLMTTVLR 245
           A + SKID+  G+HQ+ M  G E KT+FKTK+GLYEWLV+PFGL+NA STFM LM  VLR
Sbjct: 744 AKIFSKIDLRRGYHQIRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLR 803

Query: 246 DYLAKFVVVYFDDI 287
           +++ KFVVVYFDDI
Sbjct: 804 NFIGKFVVVYFDDI 817



 Score = 35.8 bits (81), Expect(2) = 3e-26
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = +2

Query: 5   ITVKYKFLIPRLNDLLDCLHGHSV 76
           ITVKY++ IPRL+D+LD LHG  +
Sbjct: 723 ITVKYRYPIPRLDDMLDELHGAKI 746


>emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]
          Length = 1082

 Score =  108 bits (271), Expect(2) = 3e-26
 Identities = 48/74 (64%), Positives = 61/74 (82%)
 Frame = +3

Query: 66  ATVSSKIDIHSGFHQVHMHPGGEQKTSFKTKDGLYEWLVVPFGLSNASSTFMHLMTTVLR 245
           + + SKID+ SG+HQ+ + PG E KTSFKTKDGLYEWLV+PFGL+NA STFM +M  VL+
Sbjct: 535 SVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRVMMQVLK 594

Query: 246 DYLAKFVVVYFDDI 287
            ++ +FVVVYFDDI
Sbjct: 595 PFIGRFVVVYFDDI 608



 Score = 34.3 bits (77), Expect(2) = 3e-26
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   KITVKYKFLIPRLNDLLDCLHG 67
           KIT+KY+F IPRL+D+LD + G
Sbjct: 513 KITIKYRFPIPRLDDMLDMMVG 534