BLASTX nr result

ID: Cimicifuga21_contig00039841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039841
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...    65   7e-09
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...    60   2e-07
gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays]         60   2e-07
gb|AFW70085.1| hypothetical protein ZEAMMB73_899248 [Zea mays]         60   2e-07
gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays]         60   2e-07

>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/67 (44%), Positives = 44/67 (65%)
 Frame = +3

Query: 102 RFPKVNWPEHASAHNNFLRQNEFLSSKILFSLPAQKPSAEETISARPMGCATVNGQMLQS 281
           + PK+NW +H  AH+NF  Q +FLSS  L+SL  QKP +E  ++ R + C   + Q LQS
Sbjct: 23  KLPKINWSQHDKAHDNFSCQKKFLSSNFLYSLENQKPHSEGVMAMR-LTCQIQSFQRLQS 81

Query: 282 PEFKQAW 302
           P+ ++AW
Sbjct: 82  PQVEKAW 88


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/65 (41%), Positives = 37/65 (56%)
 Frame = +3

Query: 108 PKVNWPEHASAHNNFLRQNEFLSSKILFSLPAQKPSAEETISARPMGCATVNGQMLQSPE 287
           PK+NW EH+ AH +F  Q +FL S  LF LP QKPS   +     + C   N Q +Q  +
Sbjct: 79  PKMNWLEHSKAHKDFSCQKKFLCSNFLFCLPEQKPSTTGSTDTGNLACQMQNLQRIQRSQ 138

Query: 288 FKQAW 302
            ++AW
Sbjct: 139 VEKAW 143


>gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
          Length = 613

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +3

Query: 108 PKVNWPEHASAHNNFLRQNEFLSSKILFSLPAQKP---SAEETISARPMGCATVNGQMLQ 278
           PKVNWP H +A   +  +++FLSS  LFSLP Q+P   + E  +S R   C     + LQ
Sbjct: 22  PKVNWPHHENAVQGYSSRDDFLSSSFLFSLPTQRPNPEARERMLSLRSSACKIQGPERLQ 81

Query: 279 SPEFKQAW 302
           +P  ++AW
Sbjct: 82  APLIEKAW 89


>gb|AFW70085.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
          Length = 281

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +3

Query: 108 PKVNWPEHASAHNNFLRQNEFLSSKILFSLPAQKP---SAEETISARPMGCATVNGQMLQ 278
           PKVNWP H +A   +  +++FLSS  LFSLP Q+P   + E  +S R   C     + LQ
Sbjct: 22  PKVNWPHHENAVQGYSSRDDFLSSSFLFSLPTQRPNPEARERMLSLRSSACKIQGPERLQ 81

Query: 279 SPEFKQAW 302
           +P  ++AW
Sbjct: 82  APLIEKAW 89


>gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
          Length = 750

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +3

Query: 108 PKVNWPEHASAHNNFLRQNEFLSSKILFSLPAQKP---SAEETISARPMGCATVNGQMLQ 278
           PKVNWP H +A   +  +++FLSS  LFSLP Q+P   + E  +S R   C     + LQ
Sbjct: 7   PKVNWPHHENAVQGYSSRDDFLSSSFLFSLPTQRPNPEARERMLSLRSSACKIQGPERLQ 66

Query: 279 SPEFKQAW 302
           +P  ++AW
Sbjct: 67  APLIEKAW 74


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