BLASTX nr result

ID: Cimicifuga21_contig00039835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039835
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614127.1| hypothetical protein MTR_5g045160 [Medicago ...   111   5e-23
ref|XP_002863659.1| hypothetical protein ARALYDRAFT_494659 [Arab...   110   2e-22
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002883559.1| predicted protein [Arabidopsis lyrata subsp....   109   2e-22
ref|NP_199152.1| uncharacterized protein [Arabidopsis thaliana] ...   109   2e-22

>ref|XP_003614127.1| hypothetical protein MTR_5g045160 [Medicago truncatula]
           gi|355515462|gb|AES97085.1| hypothetical protein
           MTR_5g045160 [Medicago truncatula]
          Length = 729

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/75 (72%), Positives = 58/75 (77%)
 Frame = -3

Query: 304 PRTPLKLVCQLRGVRGTGKSDKEGFYTAALWLHKNHPKTLAHNVKWIPQFGYFKDLPEIL 125
           P T LKLVC LRGVRGTGKS+KEGFY AALW H+NHPKTLA NV  +  FGYFKDLPEIL
Sbjct: 108 PLTALKLVCNLRGVRGTGKSNKEGFYAAALWFHENHPKTLATNVPSLADFGYFKDLPEIL 167

Query: 124 HRLLGGSRWRGNTSE 80
           +RLL GS  R    E
Sbjct: 168 YRLLEGSEVRKTQKE 182


>ref|XP_002863659.1| hypothetical protein ARALYDRAFT_494659 [Arabidopsis lyrata subsp.
           lyrata] gi|297309494|gb|EFH39918.1| hypothetical protein
           ARALYDRAFT_494659 [Arabidopsis lyrata subsp. lyrata]
          Length = 648

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = -3

Query: 304 PRTPLKLVCQLRGVRGTGKSDKEGFYTAALWLHKNHPKTLAHNVKWIPQFGYFKDLPEIL 125
           P T LKL+C LRGVRGTGKSDKEGFYTAALWL+KNHPKTLA N+  +  FGYFKDLPEIL
Sbjct: 89  PLTTLKLICNLRGVRGTGKSDKEGFYTAALWLYKNHPKTLALNIPALVDFGYFKDLPEIL 148

Query: 124 HRLLGGSR 101
            R+L G +
Sbjct: 149 FRILEGQQ 156


>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/66 (75%), Positives = 56/66 (84%)
 Frame = -3

Query: 304 PRTPLKLVCQLRGVRGTGKSDKEGFYTAALWLHKNHPKTLAHNVKWIPQFGYFKDLPEIL 125
           P T LKL+C LRGVRGTGKSDKEGFYT+A+WLH NHPKTLA N+  +  FGYFKDLPEIL
Sbjct: 95  PLTTLKLICNLRGVRGTGKSDKEGFYTSAIWLHNNHPKTLACNIPSMADFGYFKDLPEIL 154

Query: 124 HRLLGG 107
           +RLL G
Sbjct: 155 YRLLEG 160


>ref|XP_002883559.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329399|gb|EFH59818.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 718

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = -3

Query: 298 TPLKLVCQLRGVRGTGKSDKEGFYTAALWLHKNHPKTLAHNVKWIPQFGYFKDLPEILHR 119
           T LKL+C LRGVRGTGKSDKEGFYTAALWLH +HPKTLA N++ I +FGYFKD PEIL+R
Sbjct: 159 TTLKLICNLRGVRGTGKSDKEGFYTAALWLHGHHPKTLASNLESISKFGYFKDFPEILYR 218

Query: 118 LLGGSRWR 95
           +L GS  R
Sbjct: 219 ILQGSEIR 226


>ref|NP_199152.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8843892|dbj|BAA97418.1| unnamed protein product
           [Arabidopsis thaliana] gi|71905593|gb|AAZ52774.1|
           hypothetical protein At5g43390 [Arabidopsis thaliana]
           gi|91805687|gb|ABE65572.1| hypothetical protein
           At5g43390 [Arabidopsis thaliana]
           gi|332007572|gb|AED94955.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 643

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -3

Query: 304 PRTPLKLVCQLRGVRGTGKSDKEGFYTAALWLHKNHPKTLAHNVKWIPQFGYFKDLPEIL 125
           P T LKL+C LRGVRGTGKSDKEGFYTAALWL+KNHPKTLA N+  +  FGYFKDLPEIL
Sbjct: 87  PLTTLKLLCNLRGVRGTGKSDKEGFYTAALWLYKNHPKTLALNIPTLVDFGYFKDLPEIL 146

Query: 124 HRLLGGSRW-RGNT 86
            R+L G +  RG T
Sbjct: 147 LRILEGQQTERGKT 160


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