BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039761
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   125   5e-27
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   120   1e-25
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   120   1e-25
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   120   1e-25
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             119   2e-25

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/101 (53%), Positives = 76/101 (75%)
 Frame = -2

Query: 303 DNILIAHEAFHFIRGKKNLKHKFFGLKLDMQKAYDRIEWDFLESVLTRFGFSAEIIKIIM 124
           DN+L+A+E FHF+R KK  K  + GLKLDM KAYDR+EW FLE+++ + GF     K++M
Sbjct: 557 DNVLVAYECFHFLRKKKTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVM 616

Query: 123 FCISTPSFSVMINGFPCGFFKATRGLRQGDPLSPYLFILCS 1
            C+++  FSV++NG P   F  +RGLRQGDPLSP+LF++C+
Sbjct: 617 NCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCA 657


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/101 (51%), Positives = 74/101 (73%)
 Frame = -2

Query: 303 DNILIAHEAFHFIRGKKNLKHKFFGLKLDMQKAYDRIEWDFLESVLTRFGFSAEIIKIIM 124
           DNILIA E FH +R     K K+  +K DM KAYDR+EW FL +++ + GF+ + +  I+
Sbjct: 129 DNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWII 188

Query: 123 FCISTPSFSVMINGFPCGFFKATRGLRQGDPLSPYLFILCS 1
           FCIS+ S+ +++NG P GF K +RG+RQGDP+SP+LFILC+
Sbjct: 189 FCISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFLFILCT 229


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/101 (51%), Positives = 74/101 (73%)
 Frame = -2

Query: 303 DNILIAHEAFHFIRGKKNLKHKFFGLKLDMQKAYDRIEWDFLESVLTRFGFSAEIIKIIM 124
           DNILIA E FH +R     K K+  +K DM KAYDR+EW FL +++ + GF+ + +  I+
Sbjct: 495 DNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWII 554

Query: 123 FCISTPSFSVMINGFPCGFFKATRGLRQGDPLSPYLFILCS 1
           FCIS+ S+ +++NG P GF K +RG+RQGDP+SP+LFILC+
Sbjct: 555 FCISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFLFILCT 595


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/101 (55%), Positives = 72/101 (71%)
 Frame = -2

Query: 303 DNILIAHEAFHFIRGKKNLKHKFFGLKLDMQKAYDRIEWDFLESVLTRFGFSAEIIKIIM 124
           DNILIA E FH +R   + K KF  +K DM KAYD++EW+F+E++L + GF  + I  IM
Sbjct: 332 DNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIM 391

Query: 123 FCISTPSFSVMINGFPCGFFKATRGLRQGDPLSPYLFILCS 1
           +CI+T  + V+ING P G     RGLRQGDPLSPYLFILC+
Sbjct: 392 WCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCT 432


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/101 (55%), Positives = 71/101 (70%)
 Frame = -2

Query: 303 DNILIAHEAFHFIRGKKNLKHKFFGLKLDMQKAYDRIEWDFLESVLTRFGFSAEIIKIIM 124
           DNILIA E FH +R   + K KF  +K DM KAYDR+EW+F+E +L + GF  + I  IM
Sbjct: 398 DNILIAQEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKWISWIM 457

Query: 123 FCISTPSFSVMINGFPCGFFKATRGLRQGDPLSPYLFILCS 1
           +CI+T  + V++NG P G     RGLRQGDPLSPYLFILC+
Sbjct: 458 WCITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFILCT 498