BLASTX nr result
ID: Cimicifuga21_contig00039752
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00039752 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-20 ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li... 100 9e-20 ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li... 100 2e-19 ref|XP_004174038.1| PREDICTED: condensin-2 complex subunit D3-li... 91 7e-17 ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ... 91 7e-17 >ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1| predicted protein [Populus trichocarpa] Length = 1272 Score = 102 bits (254), Expect = 3e-20 Identities = 51/89 (57%), Positives = 65/89 (73%) Frame = +3 Query: 3 LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSGRKGKK 182 LCKRKAL +E E+LV+KWV QLLSKA RI+E YIT S+ + F TPPRS+ RKGK+ Sbjct: 684 LCKRKALDADEAESLVIKWVQQLLSKASRILEKYITGDSETNKGDAFFTPPRSATRKGKR 743 Query: 183 NKTTSKALLQAVTAVYTAGSLVIVSPNAE 269 S+ L +AVTAVY+ G LVI+ P+A+ Sbjct: 744 AAALSRLLSEAVTAVYSIGFLVIICPSAD 772 >ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max] Length = 1324 Score = 100 bits (250), Expect = 9e-20 Identities = 50/89 (56%), Positives = 68/89 (76%) Frame = +3 Query: 3 LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSGRKGKK 182 LCKRKA + +E E LVLKW +Q+LS+A IIE +I+E S+++ +F TPPRS RKG+K Sbjct: 739 LCKRKASNLKEAEALVLKWFHQVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTRKGRK 798 Query: 183 NKTTSKALLQAVTAVYTAGSLVIVSPNAE 269 + SKAL +A+TA+YT GSLVIV P+A+ Sbjct: 799 SVAKSKALSKAITAIYTVGSLVIVCPSAD 827 >ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max] Length = 1334 Score = 100 bits (248), Expect = 2e-19 Identities = 50/89 (56%), Positives = 68/89 (76%) Frame = +3 Query: 3 LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSGRKGKK 182 LCKRKA + EE E LVLKWV+Q+LS+A IIE +I+E S+++ +F TPPRS KG+K Sbjct: 749 LCKRKASNLEEAEALVLKWVHQVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTSKGRK 808 Query: 183 NKTTSKALLQAVTAVYTAGSLVIVSPNAE 269 + SK+L +AVTA+YT GS+VIV P+A+ Sbjct: 809 SVAKSKSLSKAVTAIYTVGSVVIVCPSAD 837 >ref|XP_004174038.1| PREDICTED: condensin-2 complex subunit D3-like, partial [Cucumis sativus] Length = 259 Score = 91.3 bits (225), Expect = 7e-17 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%) Frame = +3 Query: 3 LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSG-RKGK 179 LCKRKA E + L+LKWVNQLLSKA I+E YI+ ++ + F TPP SG R GK Sbjct: 11 LCKRKASQSTEADALILKWVNQLLSKASDILEKYISNHAEANKDVNFTTPPPKSGSRMGK 70 Query: 180 KNKTTSKALLQAVTAVYTAGSLVIVSPNAE 269 K SK+L +A+TA YT GSL+++ P+A+ Sbjct: 71 KASARSKSLSRAITAAYTIGSLILICPSAD 100 >ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like, partial [Cucumis sativus] Length = 929 Score = 91.3 bits (225), Expect = 7e-17 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%) Frame = +3 Query: 3 LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSG-RKGK 179 LCKRKA E + L+LKWVNQLLSKA I+E YI+ ++ + F TPP SG R GK Sbjct: 343 LCKRKASQSTEADALILKWVNQLLSKASDILEKYISNHAEANKDVNFTTPPPKSGSRMGK 402 Query: 180 KNKTTSKALLQAVTAVYTAGSLVIVSPNAE 269 K SK+L +A+TA YT GSL+++ P+A+ Sbjct: 403 KASARSKSLSRAITAAYTIGSLILICPSAD 432