BLASTX nr result

ID: Cimicifuga21_contig00039752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039752
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   100   9e-20
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   100   2e-19
ref|XP_004174038.1| PREDICTED: condensin-2 complex subunit D3-li...    91   7e-17
ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ...    91   7e-17

>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
           predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/89 (57%), Positives = 65/89 (73%)
 Frame = +3

Query: 3   LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSGRKGKK 182
           LCKRKAL  +E E+LV+KWV QLLSKA RI+E YIT  S+ +    F TPPRS+ RKGK+
Sbjct: 684 LCKRKALDADEAESLVIKWVQQLLSKASRILEKYITGDSETNKGDAFFTPPRSATRKGKR 743

Query: 183 NKTTSKALLQAVTAVYTAGSLVIVSPNAE 269
               S+ L +AVTAVY+ G LVI+ P+A+
Sbjct: 744 AAALSRLLSEAVTAVYSIGFLVIICPSAD 772


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/89 (56%), Positives = 68/89 (76%)
 Frame = +3

Query: 3    LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSGRKGKK 182
            LCKRKA + +E E LVLKW +Q+LS+A  IIE +I+E S+++   +F TPPRS  RKG+K
Sbjct: 739  LCKRKASNLKEAEALVLKWFHQVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTRKGRK 798

Query: 183  NKTTSKALLQAVTAVYTAGSLVIVSPNAE 269
            +   SKAL +A+TA+YT GSLVIV P+A+
Sbjct: 799  SVAKSKALSKAITAIYTVGSLVIVCPSAD 827


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/89 (56%), Positives = 68/89 (76%)
 Frame = +3

Query: 3    LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSGRKGKK 182
            LCKRKA + EE E LVLKWV+Q+LS+A  IIE +I+E S+++   +F TPPRS   KG+K
Sbjct: 749  LCKRKASNLEEAEALVLKWVHQVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTSKGRK 808

Query: 183  NKTTSKALLQAVTAVYTAGSLVIVSPNAE 269
            +   SK+L +AVTA+YT GS+VIV P+A+
Sbjct: 809  SVAKSKSLSKAVTAIYTVGSVVIVCPSAD 837


>ref|XP_004174038.1| PREDICTED: condensin-2 complex subunit D3-like, partial [Cucumis
           sativus]
          Length = 259

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSG-RKGK 179
           LCKRKA    E + L+LKWVNQLLSKA  I+E YI+  ++ +    F TPP  SG R GK
Sbjct: 11  LCKRKASQSTEADALILKWVNQLLSKASDILEKYISNHAEANKDVNFTTPPPKSGSRMGK 70

Query: 180 KNKTTSKALLQAVTAVYTAGSLVIVSPNAE 269
           K    SK+L +A+TA YT GSL+++ P+A+
Sbjct: 71  KASARSKSLSRAITAAYTIGSLILICPSAD 100


>ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit
           D3-like, partial [Cucumis sativus]
          Length = 929

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LCKRKALSPEEGETLVLKWVNQLLSKALRIIEIYITEASDKSNSSTFLTPPRSSG-RKGK 179
           LCKRKA    E + L+LKWVNQLLSKA  I+E YI+  ++ +    F TPP  SG R GK
Sbjct: 343 LCKRKASQSTEADALILKWVNQLLSKASDILEKYISNHAEANKDVNFTTPPPKSGSRMGK 402

Query: 180 KNKTTSKALLQAVTAVYTAGSLVIVSPNAE 269
           K    SK+L +A+TA YT GSL+++ P+A+
Sbjct: 403 KASARSKSLSRAITAAYTIGSLILICPSAD 432


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