BLASTX nr result

ID: Cimicifuga21_contig00039681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039681
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]    73   3e-11
ref|XP_004152233.1| PREDICTED: uncharacterized protein LOC101222...    66   3e-09
ref|XP_002515331.1| conserved hypothetical protein [Ricinus comm...    61   1e-07

>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = -2

Query: 194 RRYWRRKGYQRLDGT---NSNSRIIRLGGKKKRSWRIRAIPKLRFSFNIASPIKIFKRLR 24
           +RYWRRK YQRLDG      N+ + R GG  +R+W+I+A+PKLR   NIASP K+ ++L+
Sbjct: 13  KRYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKLLRKLK 72

Query: 23  NSYINMM 3
           N+YI+M+
Sbjct: 73  NAYISMI 79


>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
 Frame = -2

Query: 194 RRYWRRKGYQRLDGT---NSNSRIIRLGGKKKRSWRIRAIPKLRFSFNIASPIKIFKRLR 24
           +RYWRRK YQR DG      N ++ R GG  +R W+I+A+PKLR   +IASP+K+  +L+
Sbjct: 13  KRYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKLMSKLK 72

Query: 23  NSYINMM 3
           N+YINMM
Sbjct: 73  NAYINMM 79


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 GLRRYWRRKGYQRLDGTNS-NSRIIRLGGKKKRSWRIRAIPKLRFSFNIASPIKIFKRLR 24
           G  R+WRR  YQRLD  N  N +++RLGGK++R WRIR IPKL     I SP+K+  +L+
Sbjct: 11  GFGRHWRRGKYQRLDVANKRNVKMVRLGGKQRRFWRIRQIPKLH--LKIISPLKLLAKLK 68

Query: 23  NSYINMM 3
           N+Y++MM
Sbjct: 69  NAYVSMM 75


>ref|XP_004152233.1| PREDICTED: uncharacterized protein LOC101222359 [Cucumis sativus]
          Length = 154

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
 Frame = -2

Query: 203 RGLRRYWRRKGYQRLDGTNSNSRI---IRLGGKK---KRSWRIRAIPKLRFSFNIASPIK 42
           +GLRRYW+RK Y++L+G++   R    + LG  +   +R WRI+  PK RF   I SP K
Sbjct: 12  QGLRRYWKRKNYKKLNGSSRRRRRLAQVELGSTRNTRRRFWRIKISPKFRFLRKIPSPKK 71

Query: 41  IFKRLRNSYINMM 3
           +  RLR++Y+NMM
Sbjct: 72  LLLRLRDAYVNMM 84


>ref|XP_002515331.1| conserved hypothetical protein [Ricinus communis]
           gi|223545811|gb|EEF47315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 12/77 (15%)
 Frame = -2

Query: 197 LRRYWRRKGYQRLDGTNSNSRI--IRLGG----------KKKRSWRIRAIPKLRFSFNIA 54
           +R YWRR+GYQRL+ +    R+  + LGG          ++K SWRI+  PKL+  F  A
Sbjct: 12  IRSYWRRRGYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIKIKPKLKI-FKRA 70

Query: 53  SPIKIFKRLRNSYINMM 3
           SP K F  LR++Y+NMM
Sbjct: 71  SPKKFFVWLRDAYVNMM 87


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