BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039675
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB53401.1| RNA polymerase II largest subunit [Macadamia inte...   112   2e-23
gb|ACD63087.1| RNA polymerase II largest subunit [Nicotiana taba...   111   5e-23
gb|ABB53396.1| RNA polymerase II largest subunit [Hibbertia scan...   110   9e-23
gb|ABB53395.1| RNA polymerase II largest subunit [Hibbertia aspera]   110   9e-23
gb|ABB53394.1| RNA polymerase II largest subunit [Hibbertia cune...   110   9e-23

>gb|ABB53401.1| RNA polymerase II largest subunit [Macadamia integrifolia]
          Length = 240

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = -1

Query: 200 PMEIVEAIDKLQERLKVVPGDDFLSLEALKSATLLFNILLGSALASKRVLKEYGLAREAL 21
           PMEIVEA+DKLQERLKVVPGDDFLS EA K+ATLLFNILL S  ASKRVLKEYGL REA 
Sbjct: 154 PMEIVEAVDKLQERLKVVPGDDFLSTEAQKNATLLFNILLRSTFASKRVLKEYGLTREAF 213

Query: 20  DWVIGE 3
           DWVIGE
Sbjct: 214 DWVIGE 219


>gb|ACD63087.1| RNA polymerase II largest subunit [Nicotiana tabacum]
          Length = 1010

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/66 (84%), Positives = 61/66 (92%)
 Frame = -1

Query: 200  PMEIVEAIDKLQERLKVVPGDDFLSLEALKSATLLFNILLGSALASKRVLKEYGLAREAL 21
            PMEIVEA+DKLQERLKVVPGDD+LS+EA K+ATL FNILL SALASKRVLKEY L+REA 
Sbjct: 921  PMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAF 980

Query: 20   DWVIGE 3
            DWVIGE
Sbjct: 981  DWVIGE 986


>gb|ABB53396.1| RNA polymerase II largest subunit [Hibbertia scandens]
          Length = 240

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 200 PMEIVEAIDKLQERLKVVPGDDFLSLEALKSATLLFNILLGSALASKRVLKEYGLAREAL 21
           PMEIVEA+DKLQERLKVVPGDDFLS+EA K+ATL FNILL S LASKRVLKEY L REA 
Sbjct: 154 PMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTLASKRVLKEYRLTREAF 213

Query: 20  DWVIGE 3
           DWVIGE
Sbjct: 214 DWVIGE 219


>gb|ABB53395.1| RNA polymerase II largest subunit [Hibbertia aspera]
          Length = 240

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 200 PMEIVEAIDKLQERLKVVPGDDFLSLEALKSATLLFNILLGSALASKRVLKEYGLAREAL 21
           PMEIVEA+DKLQERLKVVPGDDFLS+EA K+ATL FNILL S LASKRVLKEY L REA 
Sbjct: 154 PMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTLASKRVLKEYRLTREAF 213

Query: 20  DWVIGE 3
           DWVIGE
Sbjct: 214 DWVIGE 219


>gb|ABB53394.1| RNA polymerase II largest subunit [Hibbertia cuneiformis]
          Length = 240

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 200 PMEIVEAIDKLQERLKVVPGDDFLSLEALKSATLLFNILLGSALASKRVLKEYGLAREAL 21
           PMEIVEA+DKLQERLKVVPGDDFLS+EA K+ATL FNILL S LASKRVLKEY L REA 
Sbjct: 154 PMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTLASKRVLKEYRLTREAF 213

Query: 20  DWVIGE 3
           DWVIGE
Sbjct: 214 DWVIGE 219