BLASTX nr result

ID: Cimicifuga21_contig00039664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039664
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527812.1| PREDICTED: putative cyclic nucleotide-gated ...   114   8e-24
ref|XP_003567360.1| PREDICTED: putative cyclic nucleotide-gated ...   109   2e-22
ref|XP_002280029.2| PREDICTED: putative cyclic nucleotide-gated ...   109   3e-22
emb|CBI15055.3| unnamed protein product [Vitis vinifera]              109   3e-22
emb|CAN67221.1| hypothetical protein VITISV_024547 [Vitis vinifera]   109   3e-22

>ref|XP_003527812.1| PREDICTED: putative cyclic nucleotide-gated ion channel 18-like
           [Glycine max]
          Length = 692

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/86 (59%), Positives = 67/86 (77%)
 Frame = -1

Query: 284 PGCMEIEKELFTAIFILRTLADIFYIMHMILKFRTAFVLPGSRAIGRGELERDPREIAMH 105
           P C++ + +L   + ILR+ AD+FY++HMI+KFRTAFV P SR  GRGEL  D REIAM 
Sbjct: 82  PACLQADPKLSILVTILRSFADLFYVLHMIMKFRTAFVAPNSRIFGRGELVMDAREIAMR 141

Query: 104 YLKSAFIIDFAASLPLPQIMNWIIIP 27
           YLKS F+ID AA++PLPQI+ W++IP
Sbjct: 142 YLKSDFVIDLAATIPLPQIVIWLVIP 167


>ref|XP_003567360.1| PREDICTED: putative cyclic nucleotide-gated ion channel 18-like
           [Brachypodium distachyon]
          Length = 734

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = -1

Query: 278 CMEIEKELFTAIFILRTLADIFYIMHMILKFRTAFVLPGSRAIGRGELERDPREIAMHYL 99
           C++I+  +  A+  +RT+AD+FY+ HMILKFRTAFV P SR  GRGEL RDP +IA+ YL
Sbjct: 91  CVKIDMGIGVAVTAVRTIADLFYLAHMILKFRTAFVAPSSRVFGRGELVRDPDQIAIRYL 150

Query: 98  KSAFIIDFAASLPLPQIMNWIIIPKV 21
           K+ FI+D AA LP+PQ++ W +IP V
Sbjct: 151 KNDFIVDLAAMLPIPQVIIWFVIPAV 176


>ref|XP_002280029.2| PREDICTED: putative cyclic nucleotide-gated ion channel 18, partial
           [Vitis vinifera]
          Length = 385

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 63/88 (71%)
 Frame = -1

Query: 284 PGCMEIEKELFTAIFILRTLADIFYIMHMILKFRTAFVLPGSRAIGRGELERDPREIAMH 105
           P C  I+  L   +   RT+AD+FY+ HMI+KFR AFV P SR  GRGEL  DP++IA+ 
Sbjct: 57  PACFRIDLGLGIVVTFFRTVADMFYLTHMIMKFRMAFVAPSSRVFGRGELVMDPQQIALR 116

Query: 104 YLKSAFIIDFAASLPLPQIMNWIIIPKV 21
           YLKS FIIDFAA+LPLPQ + W IIP V
Sbjct: 117 YLKSDFIIDFAATLPLPQTVIWYIIPAV 144


>emb|CBI15055.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 63/88 (71%)
 Frame = -1

Query: 284 PGCMEIEKELFTAIFILRTLADIFYIMHMILKFRTAFVLPGSRAIGRGELERDPREIAMH 105
           P C  I+  L   +   RT+AD+FY+ HMI+KFR AFV P SR  GRGEL  DP++IA+ 
Sbjct: 57  PACFRIDLGLGIVVTFFRTVADMFYLTHMIMKFRMAFVAPSSRVFGRGELVMDPQQIALR 116

Query: 104 YLKSAFIIDFAASLPLPQIMNWIIIPKV 21
           YLKS FIIDFAA+LPLPQ + W IIP V
Sbjct: 117 YLKSDFIIDFAATLPLPQTVIWYIIPAV 144


>emb|CAN67221.1| hypothetical protein VITISV_024547 [Vitis vinifera]
          Length = 685

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 63/88 (71%)
 Frame = -1

Query: 284 PGCMEIEKELFTAIFILRTLADIFYIMHMILKFRTAFVLPGSRAIGRGELERDPREIAMH 105
           P C  I+  L   +   RT+AD+FY+ HMI+KFR AFV P SR  GRGEL  DP++IA+ 
Sbjct: 57  PACFRIDLGLGIVVTFFRTVADMFYLTHMIMKFRMAFVAPSSRVFGRGELVMDPQQIALR 116

Query: 104 YLKSAFIIDFAASLPLPQIMNWIIIPKV 21
           YLKS FIIDFAA+LPLPQ + W IIP V
Sbjct: 117 YLKSDFIIDFAATLPLPQTVIWYIIPAV 144


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