BLASTX nr result

ID: Cimicifuga21_contig00039607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039607
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR10301.1| pathogen-related protein STH-2 [Salvia miltiorrhiza]    96   2e-18
emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]    80   2e-13
ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_003632378.1| PREDICTED: LOW QUALITY PROTEIN: major allerg...    74   1e-11
emb|CBI36903.3| unnamed protein product [Vitis vinifera]               74   1e-11

>gb|ABR10301.1| pathogen-related protein STH-2 [Salvia miltiorrhiza]
          Length = 160

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/76 (56%), Positives = 59/76 (77%)
 Frame = -2

Query: 233 MGVKSFYQEFKLKVSASRLFKALVTDSHEILPKVTPGIKNIEILEGGKIGHGCVYQANFP 54
           MGVKSF+QE K K+S+SRLFKALVT+S E++PK T  IK+IE+++G     G ++Q NFP
Sbjct: 1   MGVKSFFQEMKTKISSSRLFKALVTESPEVVPKFTTSIKSIELIQGSGYAPGAIFQTNFP 60

Query: 53  EGSEVSYIKHRLDEVD 6
           EG+   Y+K R+DE+D
Sbjct: 61  EGAHFKYMKCRVDEID 76


>emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]
          Length = 1172

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = -2

Query: 248  VRSKKMGVKSFYQEFKLKVSASRLFKALVTDSHEILPKVTPGIKNIEILEGGKIGHGCVY 69
            + ++ MGV +F QE    ++ + +FKAL+ DSH ++P + P IK+IE +EG   G G + 
Sbjct: 1025 IGNRNMGVHTFTQEITTPIAPAXMFKALIVDSHXLVPTLMPSIKSIEFVEGDG-GVGSIK 1083

Query: 68   QANFPEGSEVSYIKHRLDEVD 6
            Q NFPEGS   Y+KHR+D +D
Sbjct: 1084 QTNFPEGSHFKYLKHRIDAID 1104


>ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|222838567|gb|EEE76932.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/77 (45%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -2

Query: 233 MGVKSFYQEFKLKVSASRLFKALVTDSHEILPKVTPGI-KNIEILEGGKIGHGCVYQANF 57
           MGV S+ QEF   +S +R+FKAL+ DS+ ++PK+ P I K+++++ G   G G + Q NF
Sbjct: 1   MGVASYTQEFTCPISPARMFKALILDSNNLIPKLLPQIVKSVDLIHGDG-GAGSIEQVNF 59

Query: 56  PEGSEVSYIKHRLDEVD 6
            EG+++ Y+KHR+DE+D
Sbjct: 60  TEGTDIKYVKHRIDELD 76


>ref|XP_003632378.1| PREDICTED: LOW QUALITY PROTEIN: major allergen Pru ar 1-like [Vitis
           vinifera]
          Length = 204

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/72 (47%), Positives = 48/72 (66%)
 Frame = -2

Query: 221 SFYQEFKLKVSASRLFKALVTDSHEILPKVTPGIKNIEILEGGKIGHGCVYQANFPEGSE 42
           SF QE    ++ + +FKAL+ DSH ++P + P IK+IE +EG   G G + Q NFPEGS 
Sbjct: 52  SFSQEITTPIAPAIMFKALIVDSHNLVPTLMPSIKSIEFVEGDG-GVGSIKQTNFPEGSH 110

Query: 41  VSYIKHRLDEVD 6
             Y+KHR+D +D
Sbjct: 111 FKYLKHRIDAID 122


>emb|CBI36903.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/72 (47%), Positives = 48/72 (66%)
 Frame = -2

Query: 221 SFYQEFKLKVSASRLFKALVTDSHEILPKVTPGIKNIEILEGGKIGHGCVYQANFPEGSE 42
           SF QE    ++ + +FKAL+ DSH ++P + P IK+IE +EG   G G + Q NFPEGS 
Sbjct: 52  SFSQEITTPIAPAIMFKALIVDSHNLVPTLMPSIKSIEFVEGDG-GVGSIKQTNFPEGSH 110

Query: 41  VSYIKHRLDEVD 6
             Y+KHR+D +D
Sbjct: 111 FKYLKHRIDAID 122


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