BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039487
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67706.1| H0512B01.1 [Oryza sativa Indica Group]                182   3e-44
gb|ABG22001.1| retrotransposon protein, putative, Ty3-gypsy subc...   180   1e-43
gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-...   179   2e-43
emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]           179   3e-43
emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group]           179   3e-43

>emb|CAH67706.1| H0512B01.1 [Oryza sativa Indica Group]
          Length = 1454

 Score =  182 bits (461), Expect = 3e-44
 Identities = 82/129 (63%), Positives = 103/129 (79%)
 Frame = -1

Query: 388  YSKNYEEHRQHLCIILQTLRDHKLYAKFSKCHFWEEKVRFLGHVISEEGIAVDPEKVEAV 209
            YSK  EEH +HLC+ L+ LR+H+LYAKFSKC FW  +V+FLGHVIS  G+AVDP  VE+V
Sbjct: 703  YSKTKEEHEEHLCLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESV 762

Query: 208  LNWKRPSTLIKIRSFLGLAGYYRRFIEKFSLLAAPMTQLTKKDVRFLWIEDCERSFLELK 29
            L+WK+P T+ ++RSFLGLAGYYRRFIE FS +A PMT+L +KDV++ W EDCE+SF ELK
Sbjct: 763  LSWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCEQSFQELK 822

Query: 28   IRLTITSIL 2
             RL    +L
Sbjct: 823  KRLVTAPVL 831


>gb|ABG22001.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1751

 Score =  180 bits (456), Expect = 1e-43
 Identities = 82/129 (63%), Positives = 102/129 (79%)
 Frame = -1

Query: 388  YSKNYEEHRQHLCIILQTLRDHKLYAKFSKCHFWEEKVRFLGHVISEEGIAVDPEKVEAV 209
            YS+  EEH +HLC+ L+ LR+H+LYAKFSKC FW  +V+FLGHVIS  G+A+DP  VE+V
Sbjct: 973  YSRTKEEHEEHLCLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAIDPSNVESV 1032

Query: 208  LNWKRPSTLIKIRSFLGLAGYYRRFIEKFSLLAAPMTQLTKKDVRFLWIEDCERSFLELK 29
             NWK+P T+ +IRSFLGLAGYYRRFIE FS +A PMT+L +KDV++ W E+CERSF ELK
Sbjct: 1033 TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLRKDVKYKWSEECERSFQELK 1092

Query: 28   IRLTITSIL 2
             RL    IL
Sbjct: 1093 NRLISAPIL 1101


>gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550403|gb|ABA93200.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1640

 Score =  179 bits (454), Expect = 2e-43
 Identities = 82/129 (63%), Positives = 103/129 (79%)
 Frame = -1

Query: 388  YSKNYEEHRQHLCIILQTLRDHKLYAKFSKCHFWEEKVRFLGHVISEEGIAVDPEKVEAV 209
            YSK  EEH++HL + L+ LR+H+LYAKFSKC FW  +V+FLGHVIS  G+AVDP  VE+V
Sbjct: 1016 YSKTKEEHKEHLHLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISARGVAVDPSNVESV 1075

Query: 208  LNWKRPSTLIKIRSFLGLAGYYRRFIEKFSLLAAPMTQLTKKDVRFLWIEDCERSFLELK 29
            LNWK+P T+ +IRSFLGLAGYYRRFIE FS +A PMT+L +KDV++ W E+CE+SF ELK
Sbjct: 1076 LNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEECEQSFQELK 1135

Query: 28   IRLTITSIL 2
             RL    +L
Sbjct: 1136 KRLVTAPVL 1144


>emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
          Length = 1433

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/129 (63%), Positives = 102/129 (79%)
 Frame = -1

Query: 388  YSKNYEEHRQHLCIILQTLRDHKLYAKFSKCHFWEEKVRFLGHVISEEGIAVDPEKVEAV 209
            YSK  EEH +HL + L+ LR+H+LYAKFSKC FW  +V+FLGHVIS  G+AVDP  VE+V
Sbjct: 703  YSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESV 762

Query: 208  LNWKRPSTLIKIRSFLGLAGYYRRFIEKFSLLAAPMTQLTKKDVRFLWIEDCERSFLELK 29
            L+WK+P T+ ++RSFLGLAGYYRRFIE FS +A PMT+L +KDV++ W EDCERSF ELK
Sbjct: 763  LSWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCERSFQELK 822

Query: 28   IRLTITSIL 2
             RL    +L
Sbjct: 823  KRLVTAPVL 831


>emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group]
          Length = 1443

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/129 (63%), Positives = 102/129 (79%)
 Frame = -1

Query: 388  YSKNYEEHRQHLCIILQTLRDHKLYAKFSKCHFWEEKVRFLGHVISEEGIAVDPEKVEAV 209
            YSK  EEH +HL + L+ LR+H+LYAKFSKC FW  +V+FLGHVIS  G+AVDP  VE+V
Sbjct: 665  YSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESV 724

Query: 208  LNWKRPSTLIKIRSFLGLAGYYRRFIEKFSLLAAPMTQLTKKDVRFLWIEDCERSFLELK 29
            L+WK+P T+ ++RSFLGLAGYYRRFIE FS +A PMT+L +KDV++ W EDCERSF ELK
Sbjct: 725  LSWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCERSFQELK 784

Query: 28   IRLTITSIL 2
             RL    +L
Sbjct: 785  NRLVTAPVL 793