BLASTX nr result

ID: Cimicifuga21_contig00039467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039467
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66179.1| hypothetical protein VITISV_025179 [Vitis vinifera]    56   4e-06

>emb|CAN66179.1| hypothetical protein VITISV_025179 [Vitis vinifera]
          Length = 694

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
 Frame = -2

Query: 335 VWDRVLTSFHCNFSGWKRRILSRG-RXXXXXXXXXXXXXXXXXXXXXXXSMEKRLEK*QG 159
           +WD V        + WKR+ LS+G R                        + KRLEK Q 
Sbjct: 503 MWDGVEVRMRRRLALWKRQYLSKGVRIILIKSTLASIPIYQLSLFRMPKLVAKRLEKLQR 562

Query: 158 TLCGDQVRLRKNKSPSMETSVCT*EER-CLGIRRLRVVNKALLSKWLWRYKLE 3
               ++  L +         VCT +ER CLGIR++ ++NKALL KW+WR+  E
Sbjct: 563 DFLWEEGSLERKIHLINWEVVCTQKERGCLGIRKIDLLNKALLGKWIWRFAFE 615


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