BLASTX nr result

ID: Cimicifuga21_contig00039357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039357
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316000.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...    72   6e-11
emb|CBI27406.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002514579.1| pentatricopeptide repeat-containing protein,...    72   6e-11
ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    65   7e-09

>ref|XP_002316000.1| predicted protein [Populus trichocarpa] gi|222865040|gb|EEF02171.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/67 (58%), Positives = 51/67 (76%)
 Frame = -2

Query: 302 EISITDYSAVINRLCKRCSLNGVKIFLNLMFFDGISPDEQMREVMMDAFDRGGDCSSILE 123
           E+SI DYSAVINRLCKRC +N  K +  +M  DG+SPD+++ E+M++AF R G   S+ E
Sbjct: 673 EVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFE 732

Query: 122 LLAVMIK 102
           LLAVMIK
Sbjct: 733 LLAVMIK 739


>ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -2

Query: 302 EISITDYSAVINRLCKRCSLNGVKIFLNLMFFDGISPDEQMREVMMDAFDRGGDCSSILE 123
           E+SI DYSAVINRLCKR  +   K F  +M   GI PD+ +  VM++AF R GD +S+ E
Sbjct: 757 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 816

Query: 122 LLAVMIK 102
           + A+MIK
Sbjct: 817 IFAMMIK 823


>emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -2

Query: 302 EISITDYSAVINRLCKRCSLNGVKIFLNLMFFDGISPDEQMREVMMDAFDRGGDCSSILE 123
           E+SI DYSAVINRLCKR  +   K F  +M   GI PD+ +  VM++AF R GD +S+ E
Sbjct: 749 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 808

Query: 122 LLAVMIK 102
           + A+MIK
Sbjct: 809 IFAMMIK 815


>ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546183|gb|EEF47685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 840

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -2

Query: 302 EISITDYSAVINRLCKRCSLNGVKIFLNLMFFDGISPDEQMREVMMDAFDRGGDCSSILE 123
           E+SI DYSAVI RLCKRC +   K F  +M  DG+ PD+ + EV+++AF + G  +S  E
Sbjct: 768 EVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFE 827

Query: 122 LLAVMIK 102
           LLA MIK
Sbjct: 828 LLAEMIK 834


>ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = -2

Query: 299 ISITDYSAVINRLCKRCSLNGVKIFLNLMFFDGISPDEQMREVMMDAFDRGGDCSSILEL 120
           ISI DYSAVINRLCKR  +   K F  +M  +G++PD ++ + +++AF + G+ SS+ E 
Sbjct: 759 ISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEF 818

Query: 119 LAVMIK 102
           LA+++K
Sbjct: 819 LAMVVK 824


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