BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039275
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]    96   3e-18
ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
ref|XP_003602717.1| Pentatricopeptide repeat-containing protein ...    62   4e-08

>ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 558

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +2

Query: 23  MNNVYKLHARLIKTGHHKNHLSLRELLLLCIASLPESLSYAHCVFYRIRSPDTFAFNTII 202
           MN++YKLHARL+KTGHH + L+LR LLL C AS P SLSYA  +F  I  PDTFAFNTII
Sbjct: 1   MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60

Query: 203 RAYSHISPPEALSI 244
           RA++  SP  +LS+
Sbjct: 61  RAHADSSPSFSLSL 74


>emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
          Length = 558

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +2

Query: 23  MNNVYKLHARLIKTGHHKNHLSLRELLLLCIASLPESLSYAHCVFYRIRSPDTFAFNTII 202
           MN++YKLHARL+KTGHH + L+LR LLL C AS P SLSYA  +F  I  PDTFAFNTII
Sbjct: 1   MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60

Query: 203 RAYSHISPPEALSI 244
           RA++  SP  +LS+
Sbjct: 61  RAHADSSPSFSLSL 74


>ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 558

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/73 (58%), Positives = 53/73 (72%)
 Frame = +2

Query: 23  MNNVYKLHARLIKTGHHKNHLSLRELLLLCIASLPESLSYAHCVFYRIRSPDTFAFNTII 202
           MNNVY+LH  +IK+    + LSLR LLL C+A+ PESLSYA  VF RI SPDT A+NTII
Sbjct: 1   MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60

Query: 203 RAYSHISPPEALS 241
           R++S   P  +LS
Sbjct: 61  RSHSRFFPSHSLS 73


>ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 558

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/72 (58%), Positives = 52/72 (72%)
 Frame = +2

Query: 23  MNNVYKLHARLIKTGHHKNHLSLRELLLLCIASLPESLSYAHCVFYRIRSPDTFAFNTII 202
           MNNVY+LH  +IK+    + LSLR LLL C+A+ PESLSYA  VF RI SPDT A+NTII
Sbjct: 1   MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60

Query: 203 RAYSHISPPEAL 238
           R++S   P  +L
Sbjct: 61  RSHSRFFPSHSL 72


>ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491765|gb|AES72968.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 554

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = +2

Query: 23  MNNVYKLHARLIKTGHHKNHLSLRELLLLCIASLPESLSYAHCVFYRIRS-PDTFAFNTI 199
           M  VYKLHA LIKTG H+N  SLR   L C ++ P +  YA  V  R+ + PD F++NTI
Sbjct: 1   MIRVYKLHATLIKTGQHQNPHSLRPFFLTC-SNYPAAARYAATVLLRLPTPPDPFSYNTI 59

Query: 200 IRAYSHISPPEALSI 244
           I+   H+SP  A+S+
Sbjct: 60  IK---HVSPTGAISL 71