BLASTX nr result

ID: Cimicifuga21_contig00039253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039253
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262...   153   2e-35
ref|XP_002514263.1| elongation factor ts, putative [Ricinus comm...   152   2e-35
ref|XP_004169613.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   145   3e-33
ref|XP_004150558.1| PREDICTED: uncharacterized protein LOC101216...   145   3e-33
ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262932 [Vitis vinifera]
          Length = 1135

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/118 (66%), Positives = 98/118 (83%), Gaps = 2/118 (1%)
 Frame = -2

Query: 358 SKLVKGQELQGIVKNIIRAGSFVSLPEGEEGFLPTSEESVEGVANM--GSSLQVGQEVGV 185
           SK VKGQ+L+G VKN+ RAG+F+SLPEGEEGFLPTSEE+ EG  N+  GSSLQVGQEV V
Sbjct: 258 SKFVKGQDLEGTVKNLNRAGAFISLPEGEEGFLPTSEEADEGFGNLMGGSSLQVGQEVSV 317

Query: 184 RVLHVTKGRVTLTMKKEDDVENMNPEVIQVGVVHEGTKPFVFAFRRNKDMAKFLDERE 11
           RVL +++G+VTLTMKKE+D E ++ ++ + GVVH  T PFV AFR+NK++A FLDERE
Sbjct: 318 RVLRISRGQVTLTMKKEEDAEKLDLKLGE-GVVHTATNPFVLAFRKNKEIATFLDERE 374


>ref|XP_002514263.1| elongation factor ts, putative [Ricinus communis]
           gi|223546719|gb|EEF48217.1| elongation factor ts,
           putative [Ricinus communis]
          Length = 972

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/121 (64%), Positives = 100/121 (82%), Gaps = 2/121 (1%)
 Frame = -2

Query: 358 SKLVKGQELQGIVKNIIRAGSFVSLPEGEEGFLPTSEESVEGVANM--GSSLQVGQEVGV 185
           SK VKGQEL+G VKN+ R+G+F+SLPEGEEGFLPTSEES  G+ +M  GSSL+VGQEV V
Sbjct: 263 SKFVKGQELEGTVKNLTRSGTFISLPEGEEGFLPTSEESDGGLESMMGGSSLEVGQEVSV 322

Query: 184 RVLHVTKGRVTLTMKKEDDVENMNPEVIQVGVVHEGTKPFVFAFRRNKDMAKFLDERENM 5
           RVL +++G+VTLTMKKE+D   +N E++Q GVVH  T PFV AFR+N+D++ FL+ERE M
Sbjct: 323 RVLRISRGQVTLTMKKEED-NKLNTELLQ-GVVHAATNPFVLAFRKNRDISSFLEEREKM 380

Query: 4   Q 2
           +
Sbjct: 381 E 381


>ref|XP_004169613.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101216355
           [Cucumis sativus]
          Length = 1106

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/121 (59%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = -2

Query: 358 SKLVKGQELQGIVKNIIRAGSFVSLPEGEEGFLPTSEESVEGVANM--GSSLQVGQEVGV 185
           S  VKGQ+LQG VKNI R+G+F+SLPEGEEGFLP+SEE+ EG  N+  GS+L++GQEV V
Sbjct: 251 SNFVKGQDLQGTVKNITRSGAFISLPEGEEGFLPSSEETFEGFGNLMGGSTLEIGQEVNV 310

Query: 184 RVLHVTKGRVTLTMKKEDDVENMNPEVIQVGVVHEGTKPFVFAFRRNKDMAKFLDERENM 5
           RVL + +GRVTLTMKK++D +  + + IQ G V+  T PF+ AFR+N D+A FLDERE++
Sbjct: 311 RVLRIARGRVTLTMKKDEDNDKSDSQFIQ-GKVYAATNPFLLAFRKNNDIATFLDERESI 369

Query: 4   Q 2
           +
Sbjct: 370 E 370


>ref|XP_004150558.1| PREDICTED: uncharacterized protein LOC101216355 [Cucumis sativus]
          Length = 1122

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/121 (59%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = -2

Query: 358 SKLVKGQELQGIVKNIIRAGSFVSLPEGEEGFLPTSEESVEGVANM--GSSLQVGQEVGV 185
           S  VKGQ+LQG VKNI R+G+F+SLPEGEEGFLP+SEE+ EG  N+  GS+L++GQEV V
Sbjct: 252 SNFVKGQDLQGTVKNITRSGAFISLPEGEEGFLPSSEETFEGFGNLMGGSTLEIGQEVNV 311

Query: 184 RVLHVTKGRVTLTMKKEDDVENMNPEVIQVGVVHEGTKPFVFAFRRNKDMAKFLDERENM 5
           RVL + +GRVTLTMKK++D +  + + IQ G V+  T PF+ AFR+N D+A FLDERE++
Sbjct: 312 RVLRIARGRVTLTMKKDEDNDKSDSQFIQ-GKVYAATNPFLLAFRKNNDIATFLDERESI 370

Query: 4   Q 2
           +
Sbjct: 371 E 371


>ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|222866443|gb|EEF03574.1|
           predicted protein [Populus trichocarpa]
          Length = 976

 Score =  144 bits (362), Expect = 1e-32
 Identities = 76/118 (64%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
 Frame = -2

Query: 358 SKLVKGQELQGIVKNIIRAGSFVSLPEGEEGFLPTSEESVEGVANM--GSSLQVGQEVGV 185
           SK VKGQ L+G VKN+ R+G+F+SLPEGEEGFLP SEES +  A M   SSLQ+GQEV V
Sbjct: 259 SKFVKGQNLEGTVKNLTRSGAFISLPEGEEGFLPRSEESDDVFAGMMGDSSLQIGQEVSV 318

Query: 184 RVLHVTKGRVTLTMKKEDDVENMNPEVIQVGVVHEGTKPFVFAFRRNKDMAKFLDERE 11
           RVL +T+G+VTLTMKKE D +  + E+IQ G+VH  T PF+ AFR+NKD+A FLDERE
Sbjct: 319 RVLRITRGQVTLTMKKE-DADKRDTELIQ-GIVHTATNPFMLAFRKNKDIAAFLDERE 374


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