BLASTX nr result

ID: Cimicifuga21_contig00039197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039197
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin...    70   2e-10
ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thali...    59   5e-07
ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arab...    59   5e-07
dbj|BAH19464.1| AT5G35970 [Arabidopsis thaliana]                       59   5e-07
ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ...    58   9e-07

>ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
           gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2,
           putative [Ricinus communis]
          Length = 989

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/37 (81%), Positives = 36/37 (97%)
 Frame = -2

Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2
           +NV++LHQNGDPLGKK+LGK+VVKWI QGMRAMA+DF
Sbjct: 128 VNVKSLHQNGDPLGKKDLGKTVVKWISQGMRAMAADF 164


>ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana]
           gi|332006651|gb|AED94034.1| putative DNA-binding protein
           [Arabidopsis thaliana]
          Length = 961

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/37 (64%), Positives = 34/37 (91%)
 Frame = -2

Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2
           +++R L+QNGDPLG+++LG++VVKWI Q M+AMASDF
Sbjct: 102 LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDF 138


>ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
           lyrata] gi|297316296|gb|EFH46719.1| hypothetical protein
           ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata]
          Length = 979

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/37 (64%), Positives = 34/37 (91%)
 Frame = -2

Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2
           +++R L+QNGDPLG+++LG++VVKWI Q M+AMASDF
Sbjct: 120 LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDF 156


>dbj|BAH19464.1| AT5G35970 [Arabidopsis thaliana]
          Length = 626

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/37 (64%), Positives = 34/37 (91%)
 Frame = -2

Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2
           +++R L+QNGDPLG+++LG++VVKWI Q M+AMASDF
Sbjct: 102 LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDF 138


>ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
           gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding
           protein SMUBP-2-like [Cucumis sativus]
          Length = 957

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -2

Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2
           +NV+ ++QNGDPLG++ LGKSVV+WI   MRAMASDF
Sbjct: 98  VNVQGIYQNGDPLGRRELGKSVVRWIGLAMRAMASDF 134


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