BLASTX nr result
ID: Cimicifuga21_contig00039197
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00039197 (341 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin... 70 2e-10 ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thali... 59 5e-07 ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arab... 59 5e-07 dbj|BAH19464.1| AT5G35970 [Arabidopsis thaliana] 59 5e-07 ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ... 58 9e-07 >ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis] gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2, putative [Ricinus communis] Length = 989 Score = 69.7 bits (169), Expect = 2e-10 Identities = 30/37 (81%), Positives = 36/37 (97%) Frame = -2 Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2 +NV++LHQNGDPLGKK+LGK+VVKWI QGMRAMA+DF Sbjct: 128 VNVKSLHQNGDPLGKKDLGKTVVKWISQGMRAMAADF 164 >ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana] gi|332006651|gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] Length = 961 Score = 58.5 bits (140), Expect = 5e-07 Identities = 24/37 (64%), Positives = 34/37 (91%) Frame = -2 Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2 +++R L+QNGDPLG+++LG++VVKWI Q M+AMASDF Sbjct: 102 LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDF 138 >ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata] gi|297316296|gb|EFH46719.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata] Length = 979 Score = 58.5 bits (140), Expect = 5e-07 Identities = 24/37 (64%), Positives = 34/37 (91%) Frame = -2 Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2 +++R L+QNGDPLG+++LG++VVKWI Q M+AMASDF Sbjct: 120 LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDF 156 >dbj|BAH19464.1| AT5G35970 [Arabidopsis thaliana] Length = 626 Score = 58.5 bits (140), Expect = 5e-07 Identities = 24/37 (64%), Positives = 34/37 (91%) Frame = -2 Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2 +++R L+QNGDPLG+++LG++VVKWI Q M+AMASDF Sbjct: 102 LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDF 138 >ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus] gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus] Length = 957 Score = 57.8 bits (138), Expect = 9e-07 Identities = 25/37 (67%), Positives = 32/37 (86%) Frame = -2 Query: 112 INVRTLHQNGDPLGKKNLGKSVVKWICQGMRAMASDF 2 +NV+ ++QNGDPLG++ LGKSVV+WI MRAMASDF Sbjct: 98 VNVQGIYQNGDPLGRRELGKSVVRWIGLAMRAMASDF 134