BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039180
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   141   1e-31
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...   135   6e-30
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...   135   8e-30
ref|XP_003595651.1| Pentatricopeptide repeat-containing protein ...   132   6e-29
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ...   132   8e-29

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Vitis vinifera]
            gi|297745081|emb|CBI38673.3| unnamed protein product
            [Vitis vinifera]
          Length = 900

 Score =  141 bits (356), Expect = 1e-31
 Identities = 66/85 (77%), Positives = 78/85 (91%)
 Frame = +1

Query: 1    EEVGNVLSELKASGVEPNLCSYNTLIKAYGIAGMVEEAVDVVKEMREKGIEPDNVTYINL 180
            EEV NVL+ELK SG+ P+LCSYNTLIKAYGIAGMVE+AV +VKEMRE GI+PD +TYINL
Sbjct: 816  EEVANVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINL 875

Query: 181  VHALQRNDNFLEAVKWSLWMKQMGI 255
            ++AL++ND FLEAVKWSLWMKQMG+
Sbjct: 876  INALRKNDEFLEAVKWSLWMKQMGL 900



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/84 (30%), Positives = 48/84 (57%)
 Frame = +1

Query: 1   EEVGNVLSELKASGVEPNLCSYNTLIKAYGIAGMVEEAVDVVKEMREKGIEPDNVTYINL 180
           +E   VL  ++ +G  PN+ +YN LI  YG A  ++ A  + + ++  G+EPD  TY ++
Sbjct: 329 QEAERVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSM 388

Query: 181 VHALQRNDNFLEAVKWSLWMKQMG 252
           +    R +N+ EA  +   +K++G
Sbjct: 389 IEGWGRAENYKEAEWYYNELKRLG 412


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Cucumis sativus]
          Length = 894

 Score =  135 bits (341), Expect = 6e-30
 Identities = 65/83 (78%), Positives = 73/83 (87%)
 Frame = +1

Query: 1    EEVGNVLSELKASGVEPNLCSYNTLIKAYGIAGMVEEAVDVVKEMREKGIEPDNVTYINL 180
            +EV  VL+ELKA G+EP+L SYNTLIKAYGIAGMVEEA  +VKEMREK IEPD +TYIN+
Sbjct: 810  DEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINM 869

Query: 181  VHALQRNDNFLEAVKWSLWMKQM 249
            + ALQRND FLEAVKWSLWMKQM
Sbjct: 870  IRALQRNDQFLEAVKWSLWMKQM 892


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score =  135 bits (340), Expect = 8e-30
 Identities = 60/85 (70%), Positives = 75/85 (88%)
 Frame = +1

Query: 1    EEVGNVLSELKASGVEPNLCSYNTLIKAYGIAGMVEEAVDVVKEMREKGIEPDNVTYINL 180
            +EV  VL+EL+  G+ P+LCSYNTLIKAYG+AGMVE+A+D+VKEMRE GIEPD +TY NL
Sbjct: 871  DEVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNL 930

Query: 181  VHALQRNDNFLEAVKWSLWMKQMGI 255
            + ALQ+ND +LEAVKWSLWMKQ+G+
Sbjct: 931  ITALQKNDKYLEAVKWSLWMKQLGL 955


>ref|XP_003595651.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484699|gb|AES65902.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  132 bits (332), Expect = 6e-29
 Identities = 61/83 (73%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   EEVGNVLSELKASGVEPNLCSYNTLIKAYGIAGMVEEAVDVVKEMREKGIEPDNVTYINL 180
           EEV +VL+EL   G+ P+LCSYNTLIKAYGIAGMVEEAV+++KEMR+ GIEPD  TY NL
Sbjct: 701 EEVSDVLAELNECGLRPDLCSYNTLIKAYGIAGMVEEAVELIKEMRKNGIEPDQTTYTNL 760

Query: 181 VHALQRNDNFLEAVKWSLWMKQM 249
           ++AL+RND FLEAVKWSLWMKQ+
Sbjct: 761 INALKRNDKFLEAVKWSLWMKQI 783


>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297315195|gb|EFH45618.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 906

 Score =  132 bits (331), Expect = 8e-29
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +1

Query: 1    EEVGNVLSELKASGVEPNLCSYNTLIKAYGIAGMVEEAVDVVKEMREKGIEPDNVTYINL 180
            +EV  VL ELK SG+ P+LCSYNTLIKAYGI GMVEEAV +VKEMR K I PD VTY NL
Sbjct: 822  DEVAGVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNL 881

Query: 181  VHALQRNDNFLEAVKWSLWMKQMGI 255
            V AL++ND FLEA+KWSLWMKQMGI
Sbjct: 882  VTALRKNDEFLEAIKWSLWMKQMGI 906



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/84 (33%), Positives = 48/84 (57%)
 Frame = +1

Query: 1   EEVGNVLSELKASGVEPNLCSYNTLIKAYGIAGMVEEAVDVVKEMREKGIEPDNVTYINL 180
           E+  +VL  ++A+G  PN+ +YNTLI  YG    +E A  +   + + G+EPD  +Y ++
Sbjct: 333 EQAESVLISMEAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSM 392

Query: 181 VHALQRNDNFLEAVKWSLWMKQMG 252
           +    R DN+ EA  +   +K+ G
Sbjct: 393 IEGWGRADNYEEANHYYQELKRCG 416