BLASTX nr result

ID: Cimicifuga21_contig00039154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039154
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525540.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
emb|CBI35071.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002304811.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003598423.1| hypothetical protein MTR_3g013490 [Medicago ...    67   1e-09
ref|XP_003538075.1| PREDICTED: uncharacterized protein LOC100808...    66   3e-09

>ref|XP_002525540.1| conserved hypothetical protein [Ricinus communis]
            gi|223535119|gb|EEF36799.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 991

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/83 (55%), Positives = 61/83 (73%)
 Frame = +2

Query: 2    LIQSLKSGKISMGAVVIEDESSASRHLRQCASEQKLPMMSANWIIESLLLRKLIPFKENH 181
            L QSL + KIS+GA++ EDES+ASRHLR CA E+KLPMM A+WI  SL   KL+PFKE  
Sbjct: 912  LFQSLDTEKISVGAIIAEDESTASRHLRHCALERKLPMMPASWIARSLHFGKLLPFKEKD 971

Query: 182  PSFPSATNKLPECSIAMEWSEEI 250
             + P   +  PE +I+++WS+EI
Sbjct: 972  DA-PKINS--PESAISLDWSQEI 991


>emb|CBI35071.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = +2

Query: 2   LIQSLKSGKISMGAVVIEDESSASRHLRQCASEQKLPMMSANWIIESLLLRKLIPFKENH 181
           L+QSL +  IS+GA+V EDES ASRHLR CASE+K+PMM A+WII SL L +L+P  EN 
Sbjct: 611 LVQSLDTESISVGAIVAEDESRASRHLRLCASERKIPMMPASWIINSLHLGRLLPLTENK 670

Query: 182 PSFPSATNKLPECSIAMEWSEEI 250
            S P     + E   +ME+S EI
Sbjct: 671 HSSPLTRIMVQELPTSMEFSAEI 693


>ref|XP_002304811.1| predicted protein [Populus trichocarpa] gi|222842243|gb|EEE79790.1|
            predicted protein [Populus trichocarpa]
          Length = 1122

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
 Frame = +2

Query: 2    LIQSLKSGKISMGAVVIEDESSASRHLRQCASEQKLPMMSANWIIESLLLRKLIPFKENH 181
            L++SL S KISMGA+V E+E+   RHLR CASE+K+PMM A+WI +SL L KL+PF E+ 
Sbjct: 1007 LVESLDSEKISMGAIVTENETRELRHLRYCASERKIPMMPASWIAKSLHLGKLLPFIED- 1065

Query: 182  PSFPSATNKLPECSIAMEWSEEI*FSFLHPILRSVRHKAFS--SSSTVMYLEN 334
                 AT  + E    ME    I  +  H     +  KA S  SSST+ YL N
Sbjct: 1066 ----EATPSVIEVYFQMEHIRHI-TTLPHSAKFRLDSKADSGTSSSTIAYLVN 1113


>ref|XP_003598423.1| hypothetical protein MTR_3g013490 [Medicago truncatula]
            gi|355487471|gb|AES68674.1| hypothetical protein
            MTR_3g013490 [Medicago truncatula]
          Length = 1201

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/83 (37%), Positives = 55/83 (66%)
 Frame = +2

Query: 2    LIQSLKSGKISMGAVVIEDESSASRHLRQCASEQKLPMMSANWIIESLLLRKLIPFKENH 181
            L++S    +  MGA+V+E++++ SRHL+ CA E+ +P+M+++WII+SL    LIP  E +
Sbjct: 1119 LVRSTDEERTLMGAIVVEEKATISRHLKSCALERDIPIMTSSWIIKSLYSGNLIPLTEEN 1178

Query: 182  PSFPSATNKLPECSIAMEWSEEI 250
             +    + ++PE    ++ SEEI
Sbjct: 1179 STLSLRSVQVPEVRNDVDMSEEI 1201


>ref|XP_003538075.1| PREDICTED: uncharacterized protein LOC100808072 [Glycine max]
          Length = 186

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = +2

Query: 35  MGAVVIEDESSASRHLRQCASEQKLPMMSANWIIESLLLRKLIPFKE--NHPSFPSATNK 208
           +GA+V+ED+++ SRHL+ CA E+ +P+M  +WII+SL   KL+PF E  N  S P    K
Sbjct: 113 VGAIVVEDKATISRHLKHCAKERNIPIMPFSWIIKSLYSGKLLPFTEEKNTLSLPFVNVK 172

Query: 209 LPECSIAMEWSEEI 250
           + E   + + SEEI
Sbjct: 173 VSEVPSSSDMSEEI 186


Top