BLASTX nr result

ID: Cimicifuga21_contig00039147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039147
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336282.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
emb|CAN82644.1| hypothetical protein VITISV_030549 [Vitis vinifera]    67   2e-09
gb|ABK28592.1| unknown [Arabidopsis thaliana]                          67   2e-09

>ref|XP_002336282.1| predicted protein [Populus trichocarpa] gi|222833691|gb|EEE72168.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/75 (49%), Positives = 52/75 (69%)
 Frame = -1

Query: 227 SLIGPTNVQERHLFNSIPKRIHCATELYKKGIKFQVRKADTVLDIKFRNGVIEIPTVTMD 48
           S I P + QE H   S  + IH A +L++ GIKF+ R+ D+ LDI+F NGV+EIP +T+D
Sbjct: 163 STIIPASSQEVHRKISPFQLIHSAKKLHQAGIKFKPRETDSFLDIEFSNGVLEIPLLTID 222

Query: 47  DFTISLFTNCIAYEQ 3
           DF  S+  NC+A+EQ
Sbjct: 223 DFITSVILNCVAFEQ 237


>ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|222833186|gb|EEE71663.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/75 (49%), Positives = 52/75 (69%)
 Frame = -1

Query: 227 SLIGPTNVQERHLFNSIPKRIHCATELYKKGIKFQVRKADTVLDIKFRNGVIEIPTVTMD 48
           S I P + QE H   S  + IH A +L++ GIKF+ R+ D+ LDI+F NGV+EIP +T+D
Sbjct: 256 STIIPASSQEVHRKISPFQLIHSAKKLHQAGIKFKPRETDSFLDIEFSNGVLEIPLLTID 315

Query: 47  DFTISLFTNCIAYEQ 3
           DF  S+  NC+A+EQ
Sbjct: 316 DFITSVILNCVAFEQ 330


>ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|222837584|gb|EEE75949.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/55 (54%), Positives = 43/55 (78%)
 Frame = -1

Query: 167 IHCATELYKKGIKFQVRKADTVLDIKFRNGVIEIPTVTMDDFTISLFTNCIAYEQ 3
           I  A +L++ GIKF+ R+ D+ LDI+F NGV+EIP +T+DDFT S+  NC+A+EQ
Sbjct: 276 IQSAKKLHQAGIKFKPRETDSFLDIEFSNGVLEIPLLTVDDFTTSVILNCVAFEQ 330


>emb|CAN82644.1| hypothetical protein VITISV_030549 [Vitis vinifera]
          Length = 518

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/66 (45%), Positives = 46/66 (69%)
 Frame = -1

Query: 200 ERHLFNSIPKRIHCATELYKKGIKFQVRKADTVLDIKFRNGVIEIPTVTMDDFTISLFTN 21
           E H      + I   T+L   GIKF+ RKA+++LDIK++ GV+EIPT+T++D T S+  N
Sbjct: 258 EYHRSGQPGQSIQSVTQLRPSGIKFKSRKAESLLDIKYQKGVLEIPTITINDVTASVLIN 317

Query: 20  CIAYEQ 3
           C+A+E+
Sbjct: 318 CVAWEE 323


>gb|ABK28592.1| unknown [Arabidopsis thaliana]
          Length = 565

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/55 (56%), Positives = 40/55 (72%)
 Frame = -1

Query: 167 IHCATELYKKGIKFQVRKADTVLDIKFRNGVIEIPTVTMDDFTISLFTNCIAYEQ 3
           IHC TEL + GIKF+ RK D   DI+F+NG +EIP + + D T SLF+N IA+EQ
Sbjct: 383 IHCVTELREAGIKFRTRKTDRFWDIRFKNGYLEIPKLLIHDGTKSLFSNLIAFEQ 437


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