BLASTX nr result

ID: Cimicifuga21_contig00039066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039066
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   3e-09
gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indi...    66   3e-09
gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...    66   3e-09
gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    65   6e-09
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...    65   6e-09

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/89 (39%), Positives = 48/89 (53%)
 Frame = +1

Query: 1   LGFDGVPFTWSNKRFKNNGRDLIKQRLDRAIANMDLRAFFLNTYTTNLPITGSDHGPITL 180
           LGF G  FTW+N R    G  LIK+RLDRA+ N +    F +T   +LP T SDH P+ +
Sbjct: 175 LGFQGPKFTWTNGR---TGGSLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLI 231

Query: 181 NLKPNPGAIPKPFHFQSMWVASPECKTII 267
               NP +   PF  + +W   P+   +I
Sbjct: 232 LFNENPRSESFPFRCKEVWAYHPDFTNVI 260


>gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indica Group]
          Length = 815

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/80 (41%), Positives = 49/80 (61%)
 Frame = +1

Query: 1   LGFDGVPFTWSNKRFKNNGRDLIKQRLDRAIANMDLRAFFLNTYTTNLPITGSDHGPITL 180
           LG++G  +TWSNK+   +G+DL+ QRLDR +AN++    F NT   +LP+  SDH PI  
Sbjct: 39  LGYNGPAYTWSNKQ---HGKDLVLQRLDRCLANVEWCMNFPNTTVYHLPMLYSDHAPIIA 95

Query: 181 NLKPNPGAIPKPFHFQSMWV 240
            L P      + F F++ W+
Sbjct: 96  ILNPKSRRPRRSFKFENWWL 115


>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/84 (39%), Positives = 50/84 (59%)
 Frame = +1

Query: 1   LGFDGVPFTWSNKRFKNNGRDLIKQRLDRAIANMDLRAFFLNTYTTNLPITGSDHGPITL 180
           LG++G  +TWSNK+   NG DL+ +RLDR +AN++    F +T   +LP+  SDH PI  
Sbjct: 39  LGYNGPAYTWSNKK---NGCDLVLERLDRCLANVEWCMLFPHTTVYHLPMLYSDHAPIIA 95

Query: 181 NLKPNPGAIPKPFHFQSMWVASPE 252
            L P      K F F++ W++  +
Sbjct: 96  ILNPIHHHPKKSFKFENWWISEKD 119


>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/84 (36%), Positives = 50/84 (59%)
 Frame = +1

Query: 1    LGFDGVPFTWSNKRFKNNGRDLIKQRLDRAIANMDLRAFFLNTYTTNLPITGSDHGPITL 180
            +G++G  +TWSNK+    G+DL+ +RLDR +AN++    + NT   +LP+  SDH PI  
Sbjct: 944  MGYNGPAYTWSNKQ---QGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIA 1000

Query: 181  NLKPNPGAIPKPFHFQSMWVASPE 252
             L P      + F F++ W+  P+
Sbjct: 1001 ILNPKNRRPKRSFMFENWWLLEPD 1024


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/84 (36%), Positives = 50/84 (59%)
 Frame = +1

Query: 1   LGFDGVPFTWSNKRFKNNGRDLIKQRLDRAIANMDLRAFFLNTYTTNLPITGSDHGPITL 180
           +G++G  +TWSNK+    G+DL+ +RLDR +AN++    + NT   +LP+  SDH PI  
Sbjct: 168 MGYNGPAYTWSNKQ---QGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIA 224

Query: 181 NLKPNPGAIPKPFHFQSMWVASPE 252
            L P      + F F++ W+  P+
Sbjct: 225 ILNPKNRRPKRSFMFENWWLLEPD 248


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