BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039050
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding pro...   137   9e-31
sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding pro...   135   5e-30
ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Po...   134   1e-29
gb|ABK95596.1| unknown [Populus trichocarpa]                          134   1e-29
gb|ABK95601.1| unknown [Populus trichocarpa]                          133   2e-29

>sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCI type II CAB; Flags: Precursor
           gi|169214|gb|AAA33711.1| chlorophyll binding protein
           precursor [Petunia x hybrida] gi|226259|prf||1503272A
           chlorophyll binding protein
          Length = 270

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/81 (83%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = +1

Query: 58  QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAV-CVAADPDRPLWFPGSTPPPWLD 234
           QKNGSIVGATKASF GG ++LRVSKF  P+ +RSVAV  VAADPDRPLWFPGSTPP WLD
Sbjct: 21  QKNGSIVGATKASFLGG-KRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLD 79

Query: 235 GSLPGDFGFDPLGLSSDPESL 297
           GSLPGDFGFDPLGL SDPESL
Sbjct: 80  GSLPGDFGFDPLGLGSDPESL 100


>sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
           AltName: Full=LHCI type II CAB-7; Flags: Precursor
           gi|19180|emb|CAA32197.1| chlorophyll a/b-binding protein
           [Solanum lycopersicum] gi|170431|gb|AAA34159.1|
           chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|226546|prf||1601518A chlorophyll a/b binding protein
           II
          Length = 270

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/81 (80%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = +1

Query: 58  QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVA-VCVAADPDRPLWFPGSTPPPWLD 234
           ++NGSIVG TKASF GG R+LRVSK++T  + RS   VCVAADPDRPLWFPGSTPPPWLD
Sbjct: 21  RRNGSIVGTTKASFLGG-RRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLD 79

Query: 235 GSLPGDFGFDPLGLSSDPESL 297
           GSLPGDFGFDPLGL+SDPESL
Sbjct: 80  GSLPGDFGFDPLGLASDPESL 100


>ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
           gi|222846567|gb|EEE84114.1| light-harvesting complex I
           protein Lhca2 [Populus trichocarpa]
          Length = 272

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/80 (76%), Positives = 68/80 (85%)
 Frame = +1

Query: 58  QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAVCVAADPDRPLWFPGSTPPPWLDG 237
           QK G +VG+TKASF  G +KLR+ K+  P + RSV VCVAADPDRPLWFPGSTPPPWLDG
Sbjct: 24  QKTGFLVGSTKASFLSG-KKLRLKKYTAPTAARSVTVCVAADPDRPLWFPGSTPPPWLDG 82

Query: 238 SLPGDFGFDPLGLSSDPESL 297
           SLPGDFGFDPLGL SDPE+L
Sbjct: 83  SLPGDFGFDPLGLGSDPETL 102


>gb|ABK95596.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/80 (76%), Positives = 68/80 (85%)
 Frame = +1

Query: 58  QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAVCVAADPDRPLWFPGSTPPPWLDG 237
           QK G +VG+TKASF  G +KLR+ K+  P + RSV VCVAADPDRPLWFPGSTPPPWLDG
Sbjct: 21  QKTGFLVGSTKASFLSG-KKLRLKKYTAPTAARSVTVCVAADPDRPLWFPGSTPPPWLDG 79

Query: 238 SLPGDFGFDPLGLSSDPESL 297
           SLPGDFGFDPLGL SDPE+L
Sbjct: 80  SLPGDFGFDPLGLGSDPETL 99


>gb|ABK95601.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/80 (76%), Positives = 69/80 (86%)
 Frame = +1

Query: 58  QKNGSIVGATKASFFGGGRKLRVSKFATPLSTRSVAVCVAADPDRPLWFPGSTPPPWLDG 237
           QK GS+VG+TKASF  G +KLR+  + +P + RSV VCVAADPDRPLWFPGSTPPPWLDG
Sbjct: 21  QKTGSLVGSTKASFLRG-KKLRLRTYTSPTAARSVTVCVAADPDRPLWFPGSTPPPWLDG 79

Query: 238 SLPGDFGFDPLGLSSDPESL 297
           SLPGDFGFDPLGL SDPE+L
Sbjct: 80  SLPGDFGFDPLGLGSDPETL 99