BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039008
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   112   2e-23
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   107   8e-22
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          105   5e-21
ref|XP_004150989.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...    86   4e-15

>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score =  112 bits (281), Expect = 2e-23
 Identities = 64/146 (43%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = -1

Query: 436 SVLPTFQVKMDMTFEAGVSLENGKERKSTMNPEGGNFSEQASKSGQQDQFSSLNDGCRDQ 257
           S +P  Q    M   + + LE  K+R   +N    NF E+ ++S QQ   S  +   + Q
Sbjct: 464 SSMPADQSLGSMNTGSRMLLEKSKQRIPEVNVNWDNFLEETARSAQQSMPSINDKYKKTQ 523

Query: 256 KNLHPHSGATDGQDKRLSTIFKGLLFRFSSSFPEDRRAEIVEWVNEGEGTIVDDHSKQNV 77
           + +  +S   + +D + S +FKG  FRFS SFPEDRRAEIV+WVN+G G +VDD  KQNV
Sbjct: 524 QKMEQYSNTLNVKDGKESRVFKGKQFRFSHSFPEDRRAEIVQWVNQGGGDVVDDWCKQNV 583

Query: 76  QFTIGSHG-LIHKFANISQTTIVSSH 2
            F +  HG L+ K  N SQTT VSSH
Sbjct: 584 HFVVECHGALLPKSVNASQTTHVSSH 609


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  112 bits (281), Expect = 2e-23
 Identities = 64/146 (43%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = -1

Query: 436 SVLPTFQVKMDMTFEAGVSLENGKERKSTMNPEGGNFSEQASKSGQQDQFSSLNDGCRDQ 257
           S +P  Q    M   + + LE  K+R   +N    NF E+ ++S QQ   S  +   + Q
Sbjct: 464 SSMPADQSLGSMNTGSRMLLEKSKQRIPEVNVNWDNFLEETARSAQQSMPSINDKYKKTQ 523

Query: 256 KNLHPHSGATDGQDKRLSTIFKGLLFRFSSSFPEDRRAEIVEWVNEGEGTIVDDHSKQNV 77
           + +  +S   + +D + S +FKG  FRFS SFPEDRRAEIV+WVN+G G +VDD  KQNV
Sbjct: 524 QKMEQYSNTLNVKDGKESRVFKGKQFRFSHSFPEDRRAEIVQWVNQGGGDVVDDWCKQNV 583

Query: 76  QFTIGSHG-LIHKFANISQTTIVSSH 2
            F +  HG L+ K  N SQTT VSSH
Sbjct: 584 HFVVECHGALLPKSVNASQTTHVSSH 609


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/127 (45%), Positives = 79/127 (62%)
 Frame = -1

Query: 382 SLENGKERKSTMNPEGGNFSEQASKSGQQDQFSSLNDGCRDQKNLHPHSGATDGQDKRLS 203
           SLEN +E K  +        E   +  QQ+ FS +ND  +  K   P+S     Q+++  
Sbjct: 477 SLENSREEKPEIYMSRSISLEATVRQSQQNIFSIVNDEKKSGKKTQPNSSC---QNQKPL 533

Query: 202 TIFKGLLFRFSSSFPEDRRAEIVEWVNEGEGTIVDDHSKQNVQFTIGSHGLIHKFANISQ 23
           T+FKG +F FS+SFP DRRAEI+EWV++G G +V+DH+K+NV FTI  HG I +    SQ
Sbjct: 534 TVFKGKIFCFSNSFPADRRAEIIEWVSQGGGKMVEDHTKKNVNFTIECHGTIPRCMGGSQ 593

Query: 22  TTIVSSH 2
           TT VSSH
Sbjct: 594 TTYVSSH 600


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 SLENGKERKSTMNPEGGNFSEQASKSGQQDQFSSLNDGCRDQKNLHPHSGATDGQDKRLS 203
           SLEN +E K  +    G   E   +  QQ+ FS +ND  +++K +       D  D+ L 
Sbjct: 478 SLENNREEKPGIKINAGKPLEATVRQSQQNLFSVVNDKKKNEKKMQ-----LDSSDQNLK 532

Query: 202 --TIFKGLLFRFSSSFPEDRRAEIVEWVNEGEGTIVDDHSKQNVQFTIGSHGLIHKFANI 29
             ++FKG  F FS+SFPEDRRAEIV+WV++G G +++DH K+NV FTI  HG+  +  ++
Sbjct: 533 PLSVFKGKTFCFSNSFPEDRRAEIVQWVSQGGGEMLEDHVKENVHFTIECHGVTPRSVDV 592

Query: 28  SQTTIVSSH 2
            +TT VSSH
Sbjct: 593 PETTYVSSH 601


>ref|XP_004150989.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein
           1-A-like [Cucumis sativus]
          Length = 601

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
 Frame = -1

Query: 253 NLHPHSGAT--------DGQDKRLSTIFKGLLFRFSSSFPEDRRAEIVEWVNEGEGTIVD 98
           N+H   G T        +  + + S +FKG +F FSSSFPEDRRAEIVEW+N+G G +V+
Sbjct: 246 NIHVSIGKTSIAVERIEEKSETKSSCVFKGKIFCFSSSFPEDRRAEIVEWINQGGGEVVE 305

Query: 97  DHSKQNVQFTIGSHGLIHKFANISQTTIVSSH 2
           DH KQ V FT+  HG I +  ++  +T VSSH
Sbjct: 306 DHMKQKVHFTVECHGGIPRSTDV-HSTYVSSH 336