BLASTX nr result
ID: Cimicifuga21_contig00038927
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00038927 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631626.1| PREDICTED: protein TIC 62, chloroplastic iso... 83 3e-14 ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso... 83 3e-14 ref|XP_003539023.1| PREDICTED: uncharacterized protein LOC100802... 74 1e-11 ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera] 72 4e-11 >ref|XP_003631626.1| PREDICTED: protein TIC 62, chloroplastic isoform 2 [Vitis vinifera] Length = 448 Score = 82.8 bits (203), Expect = 3e-14 Identities = 44/79 (55%), Positives = 55/79 (69%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VYDDLKPPTSPSP AP TVS ST + S++ + AQ ++ +D++H Sbjct: 361 LSPYIVYDDLKPPTSPSPSAP-TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIPKDEQH 419 Query: 118 VSESKPRPLSPFTMYEDLK 62 ++KPRPLSPFTMYEDLK Sbjct: 420 HVQAKPRPLSPFTMYEDLK 438 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/79 (39%), Positives = 43/79 (54%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VY+DLKPPTSP+P + S D + PK SV + ++ ++ Sbjct: 294 LSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGI-PAEPKSIPSVLEPLSTVLAKEAIQ 352 Query: 118 VSESKPRPLSPFTMYEDLK 62 K RPLSP+ +Y+DLK Sbjct: 353 EEAKKTRPLSPYIVYDDLK 371 >ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera] gi|297741413|emb|CBI32544.3| unnamed protein product [Vitis vinifera] Length = 529 Score = 82.8 bits (203), Expect = 3e-14 Identities = 44/79 (55%), Positives = 55/79 (69%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VYDDLKPPTSPSP AP TVS ST + S++ + AQ ++ +D++H Sbjct: 442 LSPYIVYDDLKPPTSPSPSAP-TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIPKDEQH 500 Query: 118 VSESKPRPLSPFTMYEDLK 62 ++KPRPLSPFTMYEDLK Sbjct: 501 HVQAKPRPLSPFTMYEDLK 519 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/79 (39%), Positives = 43/79 (54%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VY+DLKPPTSP+P + S D + PK SV + ++ ++ Sbjct: 375 LSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGI-PAEPKSIPSVLEPLSTVLAKEAIQ 433 Query: 118 VSESKPRPLSPFTMYEDLK 62 K RPLSP+ +Y+DLK Sbjct: 434 EEAKKTRPLSPYIVYDDLK 452 >ref|XP_003539023.1| PREDICTED: uncharacterized protein LOC100802919 [Glycine max] Length = 529 Score = 73.9 bits (180), Expect = 1e-11 Identities = 42/79 (53%), Positives = 53/79 (67%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VY DLKPPTSPSP AP TVS +ST V ++ AQ +T+++ + K+H Sbjct: 442 LSPYVVYPDLKPPTSPSPNAP-TVS-VSTPAAAGVPKIDTISSNGPAQLSTADEPK-KEH 498 Query: 118 VSESKPRPLSPFTMYEDLK 62 + E K PLSP+TMYEDLK Sbjct: 499 LPEPKSTPLSPYTMYEDLK 517 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VYDDLKPP+SPSP P +S+ P+P S + D + Sbjct: 379 LSPYIVYDDLKPPSSPSPSQP------GGGKQTKISETVPQPSASDTPSSVLGVDGDSQT 432 Query: 118 VSESK-PRPLSPFTMYEDLK 62 S SK +PLSP+ +Y DLK Sbjct: 433 TSSSKVEKPLSPYVVYPDLK 452 >ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1| predicted protein [Populus trichocarpa] Length = 564 Score = 72.4 bits (176), Expect = 4e-11 Identities = 40/79 (50%), Positives = 49/79 (62%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPYP+YDDLKPPTSPSP AP + +TS+ +AVS+ + A D +H Sbjct: 484 LSPYPIYDDLKPPTSPSPTAPVGL-VATTSSINAVSKTGNNAPPTAA--------IDNQH 534 Query: 118 VSESKPRPLSPFTMYEDLK 62 E PRPLSP+ MYEDLK Sbjct: 535 HKEPNPRPLSPYPMYEDLK 553 Score = 62.8 bits (151), Expect = 3e-08 Identities = 33/79 (41%), Positives = 43/79 (54%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY YDDLKPPTSPSP AP + ++ +P P ++ D +H Sbjct: 427 LSPYVAYDDLKPPTSPSPTAPVGLVAITAPAVPKTGNSAP-PTAAI----------DNQH 475 Query: 118 VSESKPRPLSPFTMYEDLK 62 E PRPLSP+ +Y+DLK Sbjct: 476 HEEPNPRPLSPYPIYDDLK 494 Score = 55.5 bits (132), Expect = 5e-06 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 1/80 (1%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY Y+DLKPPTSP P P + + ++ +AVS L PD S A + S E K Sbjct: 362 LSPYTAYEDLKPPTSPIPTQP-SGKKENVNSVEAVSMLD-TPDPSPA--SASGIAETKPA 417 Query: 118 VSESK-PRPLSPFTMYEDLK 62 E+K RPLSP+ Y+DLK Sbjct: 418 PVETKTARPLSPYVAYDDLK 437 >emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera] Length = 535 Score = 72.4 bits (176), Expect = 4e-11 Identities = 39/74 (52%), Positives = 50/74 (67%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VYDDLKPPTSPSP AP TVS ST + S++ + AQ ++ +D++H Sbjct: 463 LSPYIVYDDLKPPTSPSPSAP-TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIPKDEQH 521 Query: 118 VSESKPRPLSPFTM 77 ++KPRPLSPFTM Sbjct: 522 HVQAKPRPLSPFTM 535 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/79 (39%), Positives = 43/79 (54%) Frame = -3 Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119 LSPY VY+DLKPPTSP+P + S D + PK SV + ++ ++ Sbjct: 396 LSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGI-PAEPKSIPSVLEPXSTVLAKEAIQ 454 Query: 118 VSESKPRPLSPFTMYEDLK 62 K RPLSP+ +Y+DLK Sbjct: 455 EEAKKTRPLSPYIVYDDLK 473