BLASTX nr result

ID: Cimicifuga21_contig00038927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038927
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631626.1| PREDICTED: protein TIC 62, chloroplastic iso...    83   3e-14
ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso...    83   3e-14
ref|XP_003539023.1| PREDICTED: uncharacterized protein LOC100802...    74   1e-11
ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]    72   4e-11

>ref|XP_003631626.1| PREDICTED: protein TIC 62, chloroplastic isoform 2 [Vitis vinifera]
          Length = 448

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/79 (55%), Positives = 55/79 (69%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VYDDLKPPTSPSP AP TVS  ST   +  S++      + AQ   ++  +D++H
Sbjct: 361 LSPYIVYDDLKPPTSPSPSAP-TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIPKDEQH 419

Query: 118 VSESKPRPLSPFTMYEDLK 62
             ++KPRPLSPFTMYEDLK
Sbjct: 420 HVQAKPRPLSPFTMYEDLK 438



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/79 (39%), Positives = 43/79 (54%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VY+DLKPPTSP+P    + S       D +    PK   SV +  ++   ++   
Sbjct: 294 LSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGI-PAEPKSIPSVLEPLSTVLAKEAIQ 352

Query: 118 VSESKPRPLSPFTMYEDLK 62
               K RPLSP+ +Y+DLK
Sbjct: 353 EEAKKTRPLSPYIVYDDLK 371


>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera]
           gi|297741413|emb|CBI32544.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/79 (55%), Positives = 55/79 (69%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VYDDLKPPTSPSP AP TVS  ST   +  S++      + AQ   ++  +D++H
Sbjct: 442 LSPYIVYDDLKPPTSPSPSAP-TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIPKDEQH 500

Query: 118 VSESKPRPLSPFTMYEDLK 62
             ++KPRPLSPFTMYEDLK
Sbjct: 501 HVQAKPRPLSPFTMYEDLK 519



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/79 (39%), Positives = 43/79 (54%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VY+DLKPPTSP+P    + S       D +    PK   SV +  ++   ++   
Sbjct: 375 LSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGI-PAEPKSIPSVLEPLSTVLAKEAIQ 433

Query: 118 VSESKPRPLSPFTMYEDLK 62
               K RPLSP+ +Y+DLK
Sbjct: 434 EEAKKTRPLSPYIVYDDLK 452


>ref|XP_003539023.1| PREDICTED: uncharacterized protein LOC100802919 [Glycine max]
          Length = 529

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/79 (53%), Positives = 53/79 (67%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VY DLKPPTSPSP AP TVS +ST     V ++        AQ +T+++ + K+H
Sbjct: 442 LSPYVVYPDLKPPTSPSPNAP-TVS-VSTPAAAGVPKIDTISSNGPAQLSTADEPK-KEH 498

Query: 118 VSESKPRPLSPFTMYEDLK 62
           + E K  PLSP+TMYEDLK
Sbjct: 499 LPEPKSTPLSPYTMYEDLK 517



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VYDDLKPP+SPSP  P             +S+  P+P  S    +      D + 
Sbjct: 379 LSPYIVYDDLKPPSSPSPSQP------GGGKQTKISETVPQPSASDTPSSVLGVDGDSQT 432

Query: 118 VSESK-PRPLSPFTMYEDLK 62
            S SK  +PLSP+ +Y DLK
Sbjct: 433 TSSSKVEKPLSPYVVYPDLK 452


>ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/79 (50%), Positives = 49/79 (62%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPYP+YDDLKPPTSPSP AP  +   +TS+ +AVS+       + A         D +H
Sbjct: 484 LSPYPIYDDLKPPTSPSPTAPVGL-VATTSSINAVSKTGNNAPPTAA--------IDNQH 534

Query: 118 VSESKPRPLSPFTMYEDLK 62
             E  PRPLSP+ MYEDLK
Sbjct: 535 HKEPNPRPLSPYPMYEDLK 553



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY  YDDLKPPTSPSP AP  +  ++          +P P  ++          D +H
Sbjct: 427 LSPYVAYDDLKPPTSPSPTAPVGLVAITAPAVPKTGNSAP-PTAAI----------DNQH 475

Query: 118 VSESKPRPLSPFTMYEDLK 62
             E  PRPLSP+ +Y+DLK
Sbjct: 476 HEEPNPRPLSPYPIYDDLK 494



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY  Y+DLKPPTSP P  P +    + ++ +AVS L   PD S A  + S   E K  
Sbjct: 362 LSPYTAYEDLKPPTSPIPTQP-SGKKENVNSVEAVSMLD-TPDPSPA--SASGIAETKPA 417

Query: 118 VSESK-PRPLSPFTMYEDLK 62
             E+K  RPLSP+  Y+DLK
Sbjct: 418 PVETKTARPLSPYVAYDDLK 437


>emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]
          Length = 535

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/74 (52%), Positives = 50/74 (67%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VYDDLKPPTSPSP AP TVS  ST   +  S++      + AQ   ++  +D++H
Sbjct: 463 LSPYIVYDDLKPPTSPSPSAP-TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIPKDEQH 521

Query: 118 VSESKPRPLSPFTM 77
             ++KPRPLSPFTM
Sbjct: 522 HVQAKPRPLSPFTM 535



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/79 (39%), Positives = 43/79 (54%)
 Frame = -3

Query: 298 LSPYPVYDDLKPPTSPSPGAPRTVSPLSTSTTDAVSQLSPKPDTSVAQYATSEKVEDKKH 119
           LSPY VY+DLKPPTSP+P    + S       D +    PK   SV +  ++   ++   
Sbjct: 396 LSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGI-PAEPKSIPSVLEPXSTVLAKEAIQ 454

Query: 118 VSESKPRPLSPFTMYEDLK 62
               K RPLSP+ +Y+DLK
Sbjct: 455 EEAKKTRPLSPYIVYDDLK 473


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