BLASTX nr result

ID: Cimicifuga21_contig00038919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038919
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      134   1e-29
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      134   1e-29
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      134   1e-29
ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783...   132   2e-29
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      132   4e-29

>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = -2

Query: 274  FYEIFVPVARIESIRLLMAIACHLRFKLYQMDVKSAFLNGHLEEKVYVEQPKGFEDSKKP 95
            F E F PVAR+ESIRLL+ +AC L+FKLYQMDVKSAFLNG+L E+VYVEQPKGF D   P
Sbjct: 1143 FDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHP 1202

Query: 94   DYVYRLRNAPYGLKQAHRAWYECLTTFL 11
            D+VYRL+ A YGLKQA RAWYE LT FL
Sbjct: 1203 DHVYRLKKALYGLKQAPRAWYERLTEFL 1230


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = -2

Query: 274  FYEIFVPVARIESIRLLMAIACHLRFKLYQMDVKSAFLNGHLEEKVYVEQPKGFEDSKKP 95
            F E F PVAR+ESIRLL+ +AC L+FKLYQMDVKSAFLNG+L E+VYVEQPKGF D   P
Sbjct: 1145 FDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHP 1204

Query: 94   DYVYRLRNAPYGLKQAHRAWYECLTTFL 11
            D+VYRL+ A YGLKQA RAWYE LT FL
Sbjct: 1205 DHVYRLKKALYGLKQAPRAWYERLTEFL 1232


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = -2

Query: 274  FYEIFVPVARIESIRLLMAIACHLRFKLYQMDVKSAFLNGHLEEKVYVEQPKGFEDSKKP 95
            F E F PVAR+ESIRLL+ +AC L+FKLYQMDVKSAFLNG+L E+VYVEQPKGF D   P
Sbjct: 1145 FDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHP 1204

Query: 94   DYVYRLRNAPYGLKQAHRAWYECLTTFL 11
            D+VYRL+ A YGLKQA RAWYE LT FL
Sbjct: 1205 DHVYRLKKALYGLKQAPRAWYERLTEFL 1232


>ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
          Length = 1470

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/88 (72%), Positives = 72/88 (81%)
 Frame = -2

Query: 274 FYEIFVPVARIESIRLLMAIACHLRFKLYQMDVKSAFLNGHLEEKVYVEQPKGFEDSKKP 95
           F E F PVAR+ESIRLL+ +AC L+FKLYQMDVKSAFLNG+L E+ YVEQPKGF D   P
Sbjct: 572 FDETFAPVARLESIRLLLGVACFLKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHP 631

Query: 94  DYVYRLRNAPYGLKQAHRAWYECLTTFL 11
           D+VYRL+ A YGLKQA RAWYE LT FL
Sbjct: 632 DHVYRLKKALYGLKQAPRAWYERLTEFL 659


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/88 (72%), Positives = 72/88 (81%)
 Frame = -2

Query: 274  FYEIFVPVARIESIRLLMAIACHLRFKLYQMDVKSAFLNGHLEEKVYVEQPKGFEDSKKP 95
            F E F PVAR+ESIRLL+ +AC L+FKLYQMDVKSAFLNG+L E+ YVEQPKGF D   P
Sbjct: 1146 FDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHP 1205

Query: 94   DYVYRLRNAPYGLKQAHRAWYECLTTFL 11
            D+VYRL+ A YGLKQA RAWYE LT FL
Sbjct: 1206 DHVYRLKKALYGLKQAPRAWYERLTEFL 1233


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