BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038812
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    79   4e-13
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo...    79   4e-13
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    79   5e-13
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    79   5e-13
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   2e-12

>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/96 (41%), Positives = 52/96 (54%)
 Frame = -3

Query: 288 KICQPKSLGGLGIRNTDNHNKALLAKLFWRLLKEPESQWASNLIRKYSHQTSLLRVRCKK 109
           K+C PK  GG+G R+  + N ALLAK  WRLL +P+S  A  L  +Y     LL  R K 
Sbjct: 307 KMCMPKGKGGMGFRDLQSFNLALLAKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKS 366

Query: 108 DSSKIWKSLMNVRSDILLNLCWHVGDGSNIDIWLDS 1
            SS  W+S++           W VGDG+ I IW D+
Sbjct: 367 GSSYTWQSILAGLQCFKQGYIWRVGDGTQIKIWEDN 402


>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
          Length = 1395

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/96 (41%), Positives = 52/96 (54%)
 Frame = -3

Query: 288 KICQPKSLGGLGIRNTDNHNKALLAKLFWRLLKEPESQWASNLIRKYSHQTSLLRVRCKK 109
           K+C PK  GG+G R+  + N ALLAK  WRLL +P+S  A  L  +Y     LL  R K 
Sbjct: 337 KMCMPKGKGGMGFRDLQSFNLALLAKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKS 396

Query: 108 DSSKIWKSLMNVRSDILLNLCWHVGDGSNIDIWLDS 1
            SS  W+S++           W VGDG+ I IW D+
Sbjct: 397 GSSYTWQSILAGLQCFKQGYIWRVGDGTQIKIWEDN 432


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/96 (41%), Positives = 58/96 (60%)
 Frame = -3

Query: 288 KICQPKSLGGLGIRNTDNHNKALLAKLFWRLLKEPESQWASNLIRKYSHQTSLLRVRCKK 109
           ++C PK  GGLG R+    N+A+LAK  WR L +P+S  A  +  KY    ++LR R KK
Sbjct: 661 RMCIPKQRGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKK 720

Query: 108 DSSKIWKSLMNVRSDILLNLCWHVGDGSNIDIWLDS 1
            SS  W+S+++  S+      W +GDGS ++IW DS
Sbjct: 721 GSSYAWQSILS-GSECFKGYIWRIGDGSQVNIWEDS 755


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/96 (41%), Positives = 58/96 (60%)
 Frame = -3

Query: 288 KICQPKSLGGLGIRNTDNHNKALLAKLFWRLLKEPESQWASNLIRKYSHQTSLLRVRCKK 109
           ++C PK  GGLG R+    N+A+LAK  WR L +P+S  A  +  KY    ++LR R KK
Sbjct: 661 RMCIPKQRGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKK 720

Query: 108 DSSKIWKSLMNVRSDILLNLCWHVGDGSNIDIWLDS 1
            SS  W+S+++  S+      W +GDGS ++IW DS
Sbjct: 721 GSSYAWQSILS-GSECFKGYIWRIGDGSQVNIWEDS 755


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/96 (36%), Positives = 56/96 (58%)
 Frame = -3

Query: 288  KICQPKSLGGLGIRNTDNHNKALLAKLFWRLLKEPESQWASNLIRKYSHQTSLLRVRCKK 109
            KICQPKS+GG+G R  +  N AL  KL W+++   ++ W   + +KY  + +LL  +   
Sbjct: 859  KICQPKSVGGVGFRKAEVTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPS 918

Query: 108  DSSKIWKSLMNVRSDILLNLCWHVGDGSNIDIWLDS 1
            ++S  WK+L+  R+     L W +GDG +I  W D+
Sbjct: 919  NASWQWKNLLRHRNFFSKGLRWLIGDGQDISFWTDN 954