BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038784
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]        99   3e-19
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]    97   1e-18
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]    89   5e-16
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab...    87   1e-15
emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera]    80   2e-13

>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 41/77 (53%), Positives = 56/77 (72%)
 Frame = -3

Query: 233 ACHIINRLPS*PGKEASPFEVVYSTKPNVSYFRVFGSLCYVHVPKGNRTKLDSKARKCVF 54
           ACH+INR+PS      +P E++ + KP++SY RVFG  C+VHVP G R KLD +A KC+F
Sbjct: 606 ACHLINRIPSATTSGLAPIEILLNKKPDLSYLRVFGCCCFVHVPAGKRDKLDKRAVKCIF 665

Query: 53  VGYDSRRKGWRCMDPET 3
           +GY   +KG+RC DPE+
Sbjct: 666 LGYSRNQKGYRCFDPES 682


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/77 (58%), Positives = 55/77 (71%)
 Frame = -3

Query: 233 ACHIINRLPS*PGKEASPFEVVYSTKPNVSYFRVFGSLCYVHVPKGNRTKLDSKARKCVF 54
           A  +INRLP      +SPFE +++ KP VSYFRVFG +CYV VP   R+K+D KA +CV 
Sbjct: 611 AAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVRCVL 670

Query: 53  VGYDSRRKGWRCMDPET 3
           VGYDS+RK WRC DP T
Sbjct: 671 VGYDSQRKXWRCCDPTT 687


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/77 (53%), Positives = 52/77 (67%)
 Frame = -3

Query: 233 ACHIINRLPS*PGKEASPFEVVYSTKPNVSYFRVFGSLCYVHVPKGNRTKLDSKARKCVF 54
           A  +INRLP      +SPFE +++ KP VSYFRVFG +CY  VP   R+K+D K  +CV 
Sbjct: 608 AAFVINRLPQQRLNFSSPFEKLWNIKPIVSYFRVFGCVCYAFVPNHXRSKMDKKXVRCVL 667

Query: 53  VGYDSRRKGWRCMDPET 3
           VGYDS+ K WRC +P T
Sbjct: 668 VGYDSQXKRWRCCNPTT 684


>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1404

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/75 (48%), Positives = 56/75 (74%)
 Frame = -3

Query: 233 ACHIINRLPS*PGKEASPFEVVYSTKPNVSYFRVFGSLCYVHVPKGNRTKLDSKARKCVF 54
           AC++INR P+    + SPFEV+ +TKP + + RVFG +C+V +P   R+KLD+K+ KC+F
Sbjct: 645 ACYLINRTPTKVLSDLSPFEVLNNTKPFIDHLRVFGCVCFVLIPGEQRSKLDAKSTKCMF 704

Query: 53  VGYDSRRKGWRCMDP 9
           +GY + +KG++C DP
Sbjct: 705 LGYSTTQKGYKCFDP 719


>emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera]
          Length = 530

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/52 (65%), Positives = 41/52 (78%)
 Frame = -3

Query: 158 KPNVSYFRVFGSLCYVHVPKGNRTKLDSKARKCVFVGYDSRRKGWRCMDPET 3
           +P VSYF+VFG +CYV VP   R+K+D KA +CV VGYDS+RKGWRC DP T
Sbjct: 358 EPTVSYFQVFGCVCYVFVPNHLRSKMDKKAVRCVLVGYDSQRKGWRCCDPTT 409