BLASTX nr result

ID: Cimicifuga21_contig00038666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038666
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71184.1| hypothetical protein VITISV_033417 [Vitis vinifera]   171   6e-41
dbj|BAA97174.1| unnamed protein product [Arabidopsis thaliana]        152   3e-35
ref|NP_199551.2| uncharacterized protein [Arabidopsis thaliana] ...   152   3e-35
ref|XP_002865121.1| predicted protein [Arabidopsis lyrata subsp....   148   4e-34
gb|ABD64961.1| hypothetical protein 25.t00068 [Brassica oleracea]     147   1e-33

>emb|CAN71184.1| hypothetical protein VITISV_033417 [Vitis vinifera]
          Length = 862

 Score =  171 bits (433), Expect = 6e-41
 Identities = 85/126 (67%), Positives = 99/126 (78%)
 Frame = -3

Query: 380 LYIGLLYAYLREFVPNYGSEAHHQPYRSSLLHYSSVYDGSLVLQMEFIVNTLIHFWLVDN 201
           LY+ LLYAYLR FVP Y   AH QPYRSSLLHYS++YDGS +LQ EF+V TL+HFW+VDN
Sbjct: 232 LYMRLLYAYLRAFVPIYDLTAH-QPYRSSLLHYSTIYDGSALLQAEFLVYTLMHFWMVDN 290

Query: 200 DFSPFPVNMCKSFGVVFPFRAVLGETPPTSGLGEVLMLLVKYLNSSWIVLNHGSEPTDHT 21
           DFSP  VN+ KSF V FPFR+VLGETPPTSGLGEV+ L VKYLN S      GS+  ++ 
Sbjct: 291 DFSPLSVNVGKSFRVSFPFRSVLGETPPTSGLGEVVKLFVKYLNLSAGAXTGGSDLVEYG 350

Query: 20  GSPRWR 3
           GSPRW+
Sbjct: 351 GSPRWK 356


>dbj|BAA97174.1| unnamed protein product [Arabidopsis thaliana]
          Length = 665

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/127 (59%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
 Frame = -3

Query: 380 LYIGLLYAYLREFVPNYGSEAHHQPYRSSLLHYSSVYDGSLVLQMEFIVNTLIHFWLVDN 201
           LYI LLY+YL+ FVP +   AH QPYRSSLLHY + YDGS++ + EF+VN  +H+WLV+N
Sbjct: 306 LYIRLLYSYLKAFVPVFDLNAH-QPYRSSLLHYGNGYDGSVMTRAEFLVNVFVHYWLVEN 364

Query: 200 DFSPFPVNMCKSFGVVFPFRAVLGETPPTSGLGEVLMLLVKYLNSSWIVLNHGSEP-TDH 24
           DFSPFPV   KSFGV  PFR+ + E PPT GL EV+ LLVKYLN SW+    GSE   ++
Sbjct: 365 DFSPFPVVTAKSFGVAPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVTSGVGSENYIEY 424

Query: 23  TGSPRWR 3
             SPRW+
Sbjct: 425 GESPRWK 431


>ref|NP_199551.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332008123|gb|AED95506.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 862

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/127 (59%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
 Frame = -3

Query: 380 LYIGLLYAYLREFVPNYGSEAHHQPYRSSLLHYSSVYDGSLVLQMEFIVNTLIHFWLVDN 201
           LYI LLY+YL+ FVP +   AH QPYRSSLLHY + YDGS++ + EF+VN  +H+WLV+N
Sbjct: 306 LYIRLLYSYLKAFVPVFDLNAH-QPYRSSLLHYGNGYDGSVMTRAEFLVNVFVHYWLVEN 364

Query: 200 DFSPFPVNMCKSFGVVFPFRAVLGETPPTSGLGEVLMLLVKYLNSSWIVLNHGSEP-TDH 24
           DFSPFPV   KSFGV  PFR+ + E PPT GL EV+ LLVKYLN SW+    GSE   ++
Sbjct: 365 DFSPFPVVTAKSFGVAPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVTSGVGSENYIEY 424

Query: 23  TGSPRWR 3
             SPRW+
Sbjct: 425 GESPRWK 431


>ref|XP_002865121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310956|gb|EFH41380.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1054

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/127 (57%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
 Frame = -3

Query: 380 LYIGLLYAYLREFVPNYGSEAHHQPYRSSLLHYSSVYDGSLVLQMEFIVNTLIHFWLVDN 201
           LY+ LLY+YL+ FVP +   AH QPYRSSLLHY + YDGS++ + EF+VN  +H+WLV+N
Sbjct: 237 LYLRLLYSYLKAFVPVFDLNAH-QPYRSSLLHYGNGYDGSVMTRAEFLVNVFVHYWLVEN 295

Query: 200 DFSPFPVNMCKSFGVVFPFRAVLGETPPTSGLGEVLMLLVKYLNSSWIVLNHGSEP-TDH 24
           DFSPFPV   KS GV  PFR+ + E PPT GL EV+ LLVKYLN SW+    GSE   ++
Sbjct: 296 DFSPFPVVTAKSVGVSPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVTSGVGSESYIEY 355

Query: 23  TGSPRWR 3
             SPRW+
Sbjct: 356 GESPRWK 362


>gb|ABD64961.1| hypothetical protein 25.t00068 [Brassica oleracea]
          Length = 1161

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
 Frame = -3

Query: 380 LYIGLLYAYLREFVPNYGSEAHHQPYRSSLLHYSSVYDGSLVLQMEFIVNTLIHFWLVDN 201
           LY+ +LY+YL+ FVP +   AH QPYRSSLL Y + YDGS++ + EF+VN  +H+W+V+N
Sbjct: 234 LYVKILYSYLKAFVPVFDLNAH-QPYRSSLLQYGNGYDGSVMARAEFLVNLFVHYWIVEN 292

Query: 200 DFSPFPVNMCKSFGVVFPFRAVLGETPPTSGLGEVLMLLVKYLNSSWIVLNHGSEP-TDH 24
           DFSPFPV   KSFGV  PFR+ + E PPT GL EV+ LLVKYLN SW+    GSE   ++
Sbjct: 293 DFSPFPVITAKSFGVAPPFRSAVEEIPPTCGLQEVVKLLVKYLNLSWVTSGVGSENYIEY 352

Query: 23  TGSPRWR 3
             SPRW+
Sbjct: 353 GESPRWK 359


Top