BLASTX nr result

ID: Cimicifuga21_contig00038567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038567
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG64447.1| hypothetical protein 2_3583_02, partial [Pinus ta...    86   2e-15
emb|CBI15253.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...    85   5e-15
ref|NP_200978.1| ABC transporter A family member 12 [Arabidopsis...    82   3e-14
sp|Q9FLT8.1|AB12A_ARATH RecName: Full=ABC transporter A family m...    82   3e-14

>gb|AFG64447.1| hypothetical protein 2_3583_02, partial [Pinus taeda]
          Length = 112

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
 Frame = +2

Query: 2   RGLYEFGEYG-----STTYGMQWKDLSK--NGMREVLIIISVEWFIVLVVAYYFDQVVSI 160
           RGL E   Y        T GMQWK+L+   NGM+E LII+SVEW I+L  AYY DQVVS+
Sbjct: 5   RGLSELANYALMGLYQGTVGMQWKNLNDHDNGMKEALIIMSVEWLIILPGAYYLDQVVSL 64

Query: 161 GSGVRKHPLFFLD 199
           GSG+R+HPLFFLD
Sbjct: 65  GSGIRRHPLFFLD 77


>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
          Length = 928

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
 Frame = +2

Query: 2   RGLYEFGEYGST-----TYGMQWKDLSK--NGMREVLIIISVEWFIVLVVAYYFDQVVSI 160
           RGLYEF +Y  T     T GM+W DLS   NGMR+VLII+ VEW IVL VAYY DQV+S 
Sbjct: 482 RGLYEFAQYSFTGNYMGTDGMRWGDLSDSTNGMRDVLIIMFVEWLIVLFVAYYIDQVLSS 541

Query: 161 GSGVRKHPLFFL 196
           G+GV++ PLFFL
Sbjct: 542 GNGVKRSPLFFL 553


>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
 Frame = +2

Query: 2   RGLYEFGEYGST-----TYGMQWKDLSK--NGMREVLIIISVEWFIVLVVAYYFDQVVSI 160
           RGLYEF +Y  T     T GM+W DLS   NGMR+VLII+ VEW IVL VAYY DQV+S 
Sbjct: 503 RGLYEFAQYSFTGNYMGTDGMRWGDLSDSTNGMRDVLIIMFVEWLIVLFVAYYIDQVLSS 562

Query: 161 GSGVRKHPLFFL 196
           G+GV++ PLFFL
Sbjct: 563 GNGVKRSPLFFL 574


>ref|NP_200978.1| ABC transporter A family member 12 [Arabidopsis thaliana]
           gi|332010124|gb|AED97507.1| ABC transporter A family
           member 12 [Arabidopsis thaliana]
          Length = 888

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = +2

Query: 2   RGLYEFGEYGSTTYGMQWKDLSKNGMREVLIIISVEWFIVLVVAYYFDQVVSIGSGVRKH 181
           RGLYEF +Y S   GM+W+DLS +GM EV  I+SVEWF+ L+VAYY DQV + G    KH
Sbjct: 453 RGLYEFSQYASRGNGMKWQDLSDSGMGEVFCIMSVEWFLALIVAYYIDQVFTSG----KH 508

Query: 182 PLFFL 196
           P FFL
Sbjct: 509 PFFFL 513


>sp|Q9FLT8.1|AB12A_ARATH RecName: Full=ABC transporter A family member 12; Short=ABC
           transporter ABCA.12; Short=AtABCA12; AltName:
           Full=Putative ABC2 homolog 16
           gi|10176863|dbj|BAB10070.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 917

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = +2

Query: 2   RGLYEFGEYGSTTYGMQWKDLSKNGMREVLIIISVEWFIVLVVAYYFDQVVSIGSGVRKH 181
           RGLYEF +Y S   GM+W+DLS +GM EV  I+SVEWF+ L+VAYY DQV + G    KH
Sbjct: 482 RGLYEFSQYASRGNGMKWQDLSDSGMGEVFCIMSVEWFLALIVAYYIDQVFTSG----KH 537

Query: 182 PLFFL 196
           P FFL
Sbjct: 538 PFFFL 542


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