BLASTX nr result

ID: Cimicifuga21_contig00038555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038555
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271044.2| PREDICTED: uncharacterized protein LOC100247...   119   2e-25
ref|XP_002277228.1| PREDICTED: uncharacterized protein LOC100259...   107   8e-22
ref|XP_002524784.1| hydrolase, putative [Ricinus communis] gi|22...   104   8e-21
ref|XP_002312721.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_004158629.1| PREDICTED: uncharacterized LOC101212223, par...    92   3e-17

>ref|XP_002271044.2| PREDICTED: uncharacterized protein LOC100247717 [Vitis vinifera]
          Length = 511

 Score =  119 bits (299), Expect = 2e-25
 Identities = 69/140 (49%), Positives = 92/140 (65%), Gaps = 13/140 (9%)
 Frame = -1

Query: 382 MQSSKFSLKPFN--IYAMLNLLSRKVRRFCSKIRWPIR-RSKPKVVIRRFGKSSSKTQ-- 218
           MQSS      FN    AML +++ ++RR CS++RWP+R RS+P+VVI+  GKSSSK+   
Sbjct: 1   MQSSSVDPILFNTNFSAMLKIINTRLRRLCSRLRWPLRGRSRPRVVIKTLGKSSSKSHFD 60

Query: 217 -PREE-------FNLNGSLGVSKVERPIRIATFNAAMFSMAPAVPIAEKSDLYDNGEEEY 62
             RE         + NG LG  K  + IRIATFNAA+FSMAPAVP AEK + + NG  E 
Sbjct: 61  AKREAAANGSAVVHPNGQLGAEKPNKTIRIATFNAALFSMAPAVPRAEKGENFGNGNVEG 120

Query: 61  LRTRRSMEMDIRAKSVNDRP 2
           L+ +RS++M+ R KS N+RP
Sbjct: 121 LKEKRSVDMNFRTKSANERP 140


>ref|XP_002277228.1| PREDICTED: uncharacterized protein LOC100259606 [Vitis vinifera]
          Length = 486

 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/120 (52%), Positives = 81/120 (67%), Gaps = 8/120 (6%)
 Frame = -1

Query: 337 MLNLLSRKVRRFCSKIRWPI-RRSKPKVVIRRFGKSSSKTQPR-------EEFNLNGSLG 182
           ML++L RK++R C+++RW + RR KPKVVIRRFGK   K QP+          +LN  LG
Sbjct: 1   MLSILHRKLQRICARLRWLMWRRPKPKVVIRRFGKLM-KRQPKGVPGSSKSAIHLNSQLG 59

Query: 181 VSKVERPIRIATFNAAMFSMAPAVPIAEKSDLYDNGEEEYLRTRRSMEMDIRAKSVNDRP 2
            S   +PIRIATFNAAMF +APAVP  EKS ++   EE+YLR +  M++D  AKS N RP
Sbjct: 60  RSISGKPIRIATFNAAMFCLAPAVPKPEKSVVFCQEEEDYLRFKSHMKIDTWAKSENYRP 119


>ref|XP_002524784.1| hydrolase, putative [Ricinus communis] gi|223535968|gb|EEF37627.1|
           hydrolase, putative [Ricinus communis]
          Length = 523

 Score =  104 bits (259), Expect = 8e-21
 Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 12/124 (9%)
 Frame = -1

Query: 337 MLNLLSRKVRRFCSKIRWPI-RRSKPKVVIRRFGKSSSK--TQPREEFNLNGSLGV---- 179
           ML +L+R++RR CS++RWPI RRS+PK++IR+ GKS+S      R E ++NGS  V    
Sbjct: 23  MLKILNRRLRRLCSRLRWPIHRRSRPKILIRKLGKSNSNHHNDSRNESSMNGSATVHPNG 82

Query: 178 -----SKVERPIRIATFNAAMFSMAPAVPIAEKSDLYDNGEEEYLRTRRSMEMDIRAKSV 14
                   E+PI+IATFNAA+FSMAP VP    S   D   E++ + + S+  ++R +S 
Sbjct: 83  LFDCLKTEEKPIKIATFNAALFSMAPVVPKVFNSSSIDYDIEDFEKGKTSLNFNLRTRSA 142

Query: 13  NDRP 2
           NDRP
Sbjct: 143 NDRP 146


>ref|XP_002312721.1| predicted protein [Populus trichocarpa] gi|222852541|gb|EEE90088.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 8/120 (6%)
 Frame = -1

Query: 337 MLNLLSRKVRRFCSKIRWPI-RRSKPKVVIRRFGKSSSKTQ-------PREEFNLNGSLG 182
           ML L+ RK+R+ C++IR  I RR +PKV+I+RFGK SSK +        +   +LNG  G
Sbjct: 1   MLGLIGRKLRQLCARIRLLIWRRPRPKVIIKRFGKISSKDRCKWRPGFRKSSIHLNGKHG 60

Query: 181 VSKVERPIRIATFNAAMFSMAPAVPIAEKSDLYDNGEEEYLRTRRSMEMDIRAKSVNDRP 2
            S  +RPIRIATFN AMFS+APAVP AE+S +     + Y+  +  +E D    SV+  P
Sbjct: 61  NSSSDRPIRIATFNVAMFSLAPAVPKAEESIMISQEHDGYMAYKSPVEFDAHVNSVSYYP 120


>ref|XP_004158629.1| PREDICTED: uncharacterized LOC101212223, partial [Cucumis sativus]
          Length = 491

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 56/135 (41%), Positives = 82/135 (60%), Gaps = 17/135 (12%)
 Frame = -1

Query: 355 PFNIYAMLNLLSRKVRRFCSKIRWPIRRS-KPKV-VIRRFGKSSSKTQPREEFNLNGSLG 182
           P  +  ML  L+RK+RR CS++RWP RR+ +P+V +I++FGK++S+T    +  ++  + 
Sbjct: 6   PPQLSTMLKFLNRKLRRLCSRLRWPRRRTIRPRVLIIKKFGKTTSQTTSHPDKTIDSFVN 65

Query: 181 VSK---------------VERPIRIATFNAAMFSMAPAVPIAEKSDLYDNGEEEYLRTRR 47
           ++                 +RPIRIATFNAA FSMAPAVP  EKS+          + RR
Sbjct: 66  IASSPSAVHPNSQFHLLTTQRPIRIATFNAASFSMAPAVP--EKSN-------SSAKFRR 116

Query: 46  SMEMDIRAKSVNDRP 2
           S++ + R KSVNDRP
Sbjct: 117 SLDSNSRTKSVNDRP 131


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