BLASTX nr result

ID: Cimicifuga21_contig00038522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038522
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...    49   2e-12
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]                47   8e-12
emb|CAN75516.1| hypothetical protein VITISV_021838 [Vitis vinifera]    48   8e-12
gb|ABI34329.1| Integrase core domain containing protein [Solanum...    48   1e-11
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            50   4e-11

>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score = 49.3 bits (116), Expect(2) = 2e-12
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = -1

Query: 126 SDIAKEYVSNELVSSLNQQCILQQLTCPYTPEQNGVAE 13
           SD AKEY S++L S L+ + I+ Q TCP+TP+QNG+AE
Sbjct: 707 SDNAKEYFSHDLSSFLSSKGIIHQSTCPHTPQQNGIAE 744



 Score = 47.4 bits (111), Expect(2) = 2e-12
 Identities = 19/43 (44%), Positives = 29/43 (67%)
 Frame = -3

Query: 265 YRYYVTFIDDYSRCTWVYLLRKKSDXXXXXXXXXXXVKTQFKK 137
           +RY+VTFID++SRCTWVYL++ +S+           ++ QF K
Sbjct: 658 FRYFVTFIDEFSRCTWVYLMKDRSELLPIFVSFYNEIENQFGK 700


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score = 47.4 bits (111), Expect(2) = 8e-12
 Identities = 17/31 (54%), Positives = 27/31 (87%)
 Frame = -3

Query: 283 ITSCSRYRYYVTFIDDYSRCTWVYLLRKKSD 191
           ++S   +RY+V+FIDDYSRCTWV+L++ +S+
Sbjct: 314 VSSTLGFRYFVSFIDDYSRCTWVFLMKDRSE 344



 Score = 47.4 bits (111), Expect(2) = 8e-12
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -1

Query: 138 RGLHSDIAKEYVSNELVSSLNQQCILQQLTCPYTPEQNGVAE 13
           R   SD A EY+S++    ++ Q I+ Q +CPYTP+QNGVAE
Sbjct: 365 RTFRSDNALEYLSSQFQEFMSHQGIIHQTSCPYTPQQNGVAE 406


>emb|CAN75516.1| hypothetical protein VITISV_021838 [Vitis vinifera]
          Length = 996

 Score = 47.8 bits (112), Expect(2) = 8e-12
 Identities = 19/46 (41%), Positives = 31/46 (67%)
 Frame = -3

Query: 280 TSCSRYRYYVTFIDDYSRCTWVYLLRKKSDXXXXXXXXXXXVKTQF 143
           TS   ++Y+VTFIDDYSRCTW++L++ +++           ++TQF
Sbjct: 498 TSTLGFQYFVTFIDDYSRCTWLFLMKNRAELLSIFHKFYAEIQTQF 543



 Score = 47.0 bits (110), Expect(2) = 8e-12
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = -1

Query: 138 RGLHSDIAKEYVSNELVSSLNQQCILQQLTCPYTPEQNGVAE 13
           R LHSD A+EY S    S ++Q  IL Q +C +TP+QNGV E
Sbjct: 548 RVLHSDNAREYCSTPFTSFMSQHGILHQSSCAHTPQQNGVVE 589


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 48.1 bits (113), Expect(2) = 1e-11
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = -1

Query: 138 RGLHSDIAKEYVSNELVSSLNQQCILQQLTCPYTPEQNGVAE 13
           R   SD A EY+S++    +  Q I+ Q TCPYTP+QNGVAE
Sbjct: 604 RTFRSDNALEYLSSQFREFMTHQGIIHQTTCPYTPQQNGVAE 645



 Score = 46.2 bits (108), Expect(2) = 1e-11
 Identities = 16/31 (51%), Positives = 27/31 (87%)
 Frame = -3

Query: 283 ITSCSRYRYYVTFIDDYSRCTWVYLLRKKSD 191
           ++S   +RY+V+FIDDYS+CTWV+L++ +S+
Sbjct: 553 VSSTLGFRYFVSFIDDYSKCTWVFLMKDRSE 583


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 50.1 bits (118), Expect(2) = 4e-11
 Identities = 19/48 (39%), Positives = 32/48 (66%)
 Frame = -3

Query: 286 PITSCSRYRYYVTFIDDYSRCTWVYLLRKKSDXXXXXXXXXXXVKTQF 143
           P+TS + +RY+VTF+DD+SR TW+Y ++ +S+           +KTQ+
Sbjct: 524 PVTSQTGFRYFVTFVDDFSRMTWIYFMKNRSEVFSHFCAFSAEIKTQY 571



 Score = 42.4 bits (98), Expect(2) = 4e-11
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = -1

Query: 132 LHSDIAKEYVSNELVSSLNQQCILQQLTCPYTPEQNGVAE 13
           L SD  KEYVSN   + ++   IL Q +C  TP QNGVAE
Sbjct: 578 LRSDNGKEYVSNSFQNYMSHNGILHQTSCVDTPSQNGVAE 617


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