BLASTX nr result

ID: Cimicifuga21_contig00038454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038454
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532238.1| transcription factor, putative [Ricinus comm...   160   3e-37
ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [V...   158   1e-36
ref|XP_002864517.1| indoleacetic acid-induced protein 33 [Arabid...   156   4e-36
gb|ADL70834.1| indole-3-acetic acid inducible 33 [Arabidopsis th...   155   1e-35
gb|ADL70833.1| indole-3-acetic acid inducible 33 [Arabidopsis th...   155   1e-35

>ref|XP_002532238.1| transcription factor, putative [Ricinus communis]
           gi|223528072|gb|EEF30147.1| transcription factor,
           putative [Ricinus communis]
          Length = 173

 Score =  160 bits (404), Expect = 3e-37
 Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 8/175 (4%)
 Frame = +2

Query: 71  QQNSTMKRRWQ---EKRLNNDDQRFNSAEFYAKLMGTRPPTAPTTTYNNMGRRNISGFPR 241
           +Q+ ++KRRW    ++ L++ + R N    +A           T T+ +    N   FP 
Sbjct: 10  RQDHSLKRRWHAEIKRSLSSSNIRPNFNVTHAN----------TPTFIS----NSKPFPA 55

Query: 242 I---EENRVPTMVPQVTVVLEGRSICQRISLEKHSSYQSLAKALRQMFVDEGEVEFL--S 406
           +   +++ V T+VP VTVVLEGRSICQRISL KH+SYQSLA ALRQMFVD G+   +  S
Sbjct: 56  LYDDDDDLVSTVVPPVTVVLEGRSICQRISLHKHASYQSLAMALRQMFVDGGDAGGVTDS 115

Query: 407 DKEVDLSNAIPGHVIAYQDMEDDLLLVGDLNYKDFVRFAQRIRIIPVKPNSRKGR 571
           D ++DL+NA+PGH+IAY+DME+DLLL GDLN+KDFVR A+RIRI+PVK NSRKGR
Sbjct: 116 DTDLDLTNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPVKGNSRKGR 170


>ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [Vitis vinifera]
           gi|297735399|emb|CBI17839.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  158 bits (399), Expect = 1e-36
 Identities = 90/170 (52%), Positives = 115/170 (67%), Gaps = 4/170 (2%)
 Frame = +2

Query: 74  QNSTMKRRWQEKRLNNDDQRFNSAEFYAKLMGTRPPTAPTTTYNNMGRRNISGFPRI-EE 250
           Q+S   RRW +      + R +SA FYA+     P  + ++         I  FP + ++
Sbjct: 11  QDSFDSRRWSQ------NHRPSSAGFYARRAAAPPQPSSSS---------IQTFPGLADD 55

Query: 251 NRVPTMVPQVTVVLEGRSICQRISLEKHSSYQSLAKALRQMFVDEGEVEFLS---DKEVD 421
           + V  +VP VTVVLEGRSIC RISL  H+SYQSLA+ALRQMFVD    +  +   D E+D
Sbjct: 56  DLVAAVVPPVTVVLEGRSICHRISLHSHASYQSLARALRQMFVDGSSADVGAAGGDHELD 115

Query: 422 LSNAIPGHVIAYQDMEDDLLLVGDLNYKDFVRFAQRIRIIPVKPNSRKGR 571
           LSNA+PGH+IAY+DME+DLLL GDLN+KDFVR A+RIRI+P K NSRKGR
Sbjct: 116 LSNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPAKRNSRKGR 165


>ref|XP_002864517.1| indoleacetic acid-induced protein 33 [Arabidopsis lyrata subsp.
           lyrata] gi|297310352|gb|EFH40776.1| indoleacetic
           acid-induced protein 33 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 171

 Score =  156 bits (394), Expect = 4e-36
 Identities = 86/173 (49%), Positives = 117/173 (67%), Gaps = 1/173 (0%)
 Frame = +2

Query: 59  AFDSQQNSTMKRRWQEKRLNNDDQRFNSAEFYAKLMGTRPPTAPTTTYNNMGRRNISGFP 238
           +F+ Q   +++RR+ +        R  +  F +K        + +++      R+  GF 
Sbjct: 3   SFEPQTQDSLQRRFHQDNTTTHQPRDTTTPFISKPASKNHNNSNSSS--EAAGRSFQGFG 60

Query: 239 -RIEENRVPTMVPQVTVVLEGRSICQRISLEKHSSYQSLAKALRQMFVDEGEVEFLSDKE 415
             +E++ V ++VP VTVVLEGRSICQRISL+KH SYQSLA ALRQMFVD  +    S  +
Sbjct: 61  LNVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLALALRQMFVDGAD----STDD 116

Query: 416 VDLSNAIPGHVIAYQDMEDDLLLVGDLNYKDFVRFAQRIRIIPVKPNSRKGRR 574
           +DLSNAIPGH+IAY+DME+DLLL GDL +KDFVR A+RIRI+PVK N+RK +R
Sbjct: 117 LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRKVKR 169


>gb|ADL70834.1| indole-3-acetic acid inducible 33 [Arabidopsis thaliana]
           gi|304322745|gb|ADL70843.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
          Length = 170

 Score =  155 bits (391), Expect = 1e-35
 Identities = 85/173 (49%), Positives = 116/173 (67%), Gaps = 1/173 (0%)
 Frame = +2

Query: 59  AFDSQQNSTMKRRWQEKRLNNDDQRFNSAEFYAKLMGTRPPTAPTTTYNNMGRRNISGFP 238
           +F+ Q   +++RR+ +        R  +  F  K        + +++      R+  GF 
Sbjct: 2   SFEPQSQDSLQRRFHQDNSTTQQPRDTTTPFIPKPASKNHNNSNSSS--GAAGRSFQGFG 59

Query: 239 -RIEENRVPTMVPQVTVVLEGRSICQRISLEKHSSYQSLAKALRQMFVDEGEVEFLSDKE 415
             +E++ V ++VP VTVVLEGRSICQRISL+KH SYQSLA ALRQMFVD  +    S  +
Sbjct: 60  LNVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD----STDD 115

Query: 416 VDLSNAIPGHVIAYQDMEDDLLLVGDLNYKDFVRFAQRIRIIPVKPNSRKGRR 574
           +DLSNAIPGH+IAY+DME+DLLL GDL +KDFVR A+RIRI+PVK N+R+ +R
Sbjct: 116 LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKR 168


>gb|ADL70833.1| indole-3-acetic acid inducible 33 [Arabidopsis thaliana]
           gi|304322731|gb|ADL70836.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
           gi|304322737|gb|ADL70839.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
          Length = 170

 Score =  155 bits (391), Expect = 1e-35
 Identities = 85/173 (49%), Positives = 116/173 (67%), Gaps = 1/173 (0%)
 Frame = +2

Query: 59  AFDSQQNSTMKRRWQEKRLNNDDQRFNSAEFYAKLMGTRPPTAPTTTYNNMGRRNISGFP 238
           +F+ Q   +++RR+ +        R  +  F  K        + +++      R+  GF 
Sbjct: 2   SFEPQSQDSLQRRFHQDNSTTQQPRDTTTPFIPKPASKNHNNSNSSS--GAAGRSFQGFG 59

Query: 239 -RIEENRVPTMVPQVTVVLEGRSICQRISLEKHSSYQSLAKALRQMFVDEGEVEFLSDKE 415
             +E++ V ++VP VTVVLEGRSICQRISL+KH SYQSLA ALRQMFVD  +    S  +
Sbjct: 60  LNVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD----STDD 115

Query: 416 VDLSNAIPGHVIAYQDMEDDLLLVGDLNYKDFVRFAQRIRIIPVKPNSRKGRR 574
           +DLSNAIPGH+IAY+DME+DLLL GDL +KDFVR A+RIRI+PVK N+R+ +R
Sbjct: 116 LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKR 168


Top