BLASTX nr result
ID: Cimicifuga21_contig00038360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00038360
(283 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera] 93 3e-17
ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arab... 90 2e-16
ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group] g... 88 6e-16
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi... 86 2e-15
>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 92.8 bits (229), Expect = 3e-17
Identities = 40/94 (42%), Positives = 62/94 (65%)
Frame = -1
Query: 283 VASWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHS 104
V SW SLV GC + E L++F + G+ PD+I + A+L C+ L +LE+GKQ+H+
Sbjct: 407 VISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHA 466
Query: 103 LCVKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
+K+GL + ++NS+V MY+KCG ++D KVF
Sbjct: 467 NFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 500
Score = 64.3 bits (155), Expect = 1e-08
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = -1
Query: 277 SWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLC 98
+W+SL+ G L++F + G +P++ T ++L +CS V+LE GKQIH+
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164
Query: 97 VKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
+KT D + +VDMY+KC + + +F
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF 196
Score = 63.9 bits (154), Expect = 1e-08
Identities = 25/90 (27%), Positives = 51/90 (56%)
Frame = -1
Query: 274 WNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLCV 95
W ++V G + + G + ++ F D G++ ++ T +IL C ++ +G Q+H V
Sbjct: 208 WTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIV 267
Query: 94 KTGLDRRIRIENSMVDMYSKCGSLKDGTKV 5
++G + + +++VDMYSKCG L + ++
Sbjct: 268 RSGFGANVFVGSALVDMYSKCGDLSNARRM 297
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = -1
Query: 277 SWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLC 98
SWNS++ GC GE L +F MK DE T ++L S ++ + +HSL
Sbjct: 308 SWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLI 367
Query: 97 VKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
VKTG + + N++VDMY+K G VF
Sbjct: 368 VKTGFEAYKLVNNALVDMYAKRGYFDYAFDVF 399
>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 92.8 bits (229), Expect = 3e-17
Identities = 40/94 (42%), Positives = 62/94 (65%)
Frame = -1
Query: 283 VASWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHS 104
V SW SLV GC + E L++F + G+ PD+I + A+L C+ L +LE+GKQ+H+
Sbjct: 33 VISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHA 92
Query: 103 LCVKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
+K+GL + ++NS+V MY+KCG ++D KVF
Sbjct: 93 NFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 126
>ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata] gi|297312278|gb|EFH42702.1| hypothetical protein
ARALYDRAFT_919404 [Arabidopsis lyrata subsp. lyrata]
Length = 749
Score = 89.7 bits (221), Expect = 2e-16
Identities = 40/92 (43%), Positives = 61/92 (66%)
Frame = -1
Query: 277 SWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLC 98
SW +LV + S + E L VF+ E G +P+++T + +L C++L LEYG+Q+HSL
Sbjct: 435 SWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLT 494
Query: 97 VKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
KTG R +E+ ++DMY+KCGS++D KVF
Sbjct: 495 CKTGFARDKCVESVLIDMYAKCGSVRDAIKVF 526
Score = 54.3 bits (129), Expect = 1e-05
Identities = 28/91 (30%), Positives = 50/91 (54%)
Frame = -1
Query: 274 WNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLCV 95
WN+++ G S GE + +F ++ +K D T + L +++ LEY KQ+H +
Sbjct: 336 WNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIW 395
Query: 94 KTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
K+G + + N+++D Y+KCG L K+F
Sbjct: 396 KSG-SIGVSLCNALMDAYAKCGELDAMRKLF 425
>ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like
[Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like
[Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa
Japonica Group] gi|215686971|dbj|BAG90841.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 819
Score = 88.2 bits (217), Expect = 6e-16
Identities = 36/91 (39%), Positives = 61/91 (67%)
Frame = -1
Query: 274 WNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLCV 95
WNS++ G A ++QGE +++FN L SGM P+E T A++ + S L + +G+Q H+ +
Sbjct: 492 WNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWII 551
Query: 94 KTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
K G+D + N+++DMY+KCG +K+G +F
Sbjct: 552 KAGVDNDPHVSNALIDMYAKCGFIKEGRMLF 582
Score = 63.2 bits (152), Expect = 2e-08
Identities = 27/94 (28%), Positives = 52/94 (55%)
Frame = -1
Query: 283 VASWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHS 104
+ SW +++ G + + +F + ++G +PD T+IL C +L + G+QIH+
Sbjct: 287 LVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHA 346
Query: 103 LCVKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
+K L+ ++N+++DMY+KC L + VF
Sbjct: 347 HVIKADLEADEYVKNALIDMYAKCEHLTEARAVF 380
Score = 60.5 bits (145), Expect = 1e-07
Identities = 26/92 (28%), Positives = 52/92 (56%)
Frame = -1
Query: 277 SWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLC 98
S+N+++EG + + + +F ++P +T ++LG+ S+ + +E KQIH L
Sbjct: 390 SYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLI 449
Query: 97 VKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
+K+G + ++++D+YSKC + D VF
Sbjct: 450 IKSGTSLDLYAASALIDVYSKCSLVNDAKTVF 481
Score = 58.9 bits (141), Expect = 4e-07
Identities = 27/92 (29%), Positives = 48/92 (52%)
Frame = -1
Query: 277 SWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLC 98
+WN+++ G A G L++F+ G++PD + + + CS L LE G+QIH
Sbjct: 188 TWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYA 247
Query: 97 VKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
++ + + N ++D+Y KC L K+F
Sbjct: 248 YRSATETDTSVINVLIDLYCKCSRLSAARKLF 279
>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 86.3 bits (212), Expect = 2e-15
Identities = 37/92 (40%), Positives = 61/92 (66%)
Frame = -1
Query: 277 SWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSLC 98
SW SLV + + ++ +++F++ G+ P++ T +++L C+NL +LEYG+Q+H +
Sbjct: 444 SWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGII 503
Query: 97 VKTGLDRRIRIENSMVDMYSKCGSLKDGTKVF 2
K GLD IE+++VDMY+KCG L D KVF
Sbjct: 504 CKVGLDMDKCIESALVDMYAKCGCLGDAKKVF 535
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -1
Query: 280 ASWNSLVEGCAGSDQGERGLQVFNDFLESGMKPDEITMTAILGICSNLVILEYGKQIHSL 101
A WN+++ G S E+ L++F ++ + D T ++ + L L GK++H+
Sbjct: 341 APWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHAR 400
Query: 100 CVKTGLD-RRIRIENSMVDMYSKCGSLKDGTKVF 2
+K+GL+ + I N++ + Y+KCGSL+D KVF
Sbjct: 401 AIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVF 434