BLASTX nr result

ID: Cimicifuga21_contig00038290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038290
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531235.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_002884501.1| hypothetical protein ARALYDRAFT_477820 [Arab...   123   1e-26
ref|NP_187183.3| O-fucosyltransferase family protein [Arabidopsi...   119   2e-25
ref|XP_002273827.1| PREDICTED: uncharacterized protein LOC100252...   111   5e-23
ref|XP_003534761.1| PREDICTED: uncharacterized protein LOC100785...   110   2e-22

>ref|XP_002531235.1| conserved hypothetical protein [Ricinus communis]
           gi|223529172|gb|EEF31149.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 446

 Score =  124 bits (310), Expect = 1e-26
 Identities = 70/118 (59%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
 Frame = -2

Query: 345 NCKDARFFNRY---TACRCLSLLFIALVLRAXXXXXXXXXXXXXXXXFDWIHISSFLSPL 175
           N K  R F R      C+CLSL+ I LVLR                  D I   S     
Sbjct: 6   NYKHPRLFGRNLNSVTCKCLSLVVILLVLRVVLLSSFSDYGRINQKDIDLIPSRSLSLDS 65

Query: 174 ENGVRKDKYLEVPQIVWGLNNQKIAFARACLTARMLNRTLLMPNLSASLFYKEVDLLQ 1
           + GVRKDK+LEVPQIVWGLNNQKIAFARACLTARMLNRTLLMP LSASLFYKE+D LQ
Sbjct: 66  DYGVRKDKFLEVPQIVWGLNNQKIAFARACLTARMLNRTLLMPKLSASLFYKEIDRLQ 123


>ref|XP_002884501.1| hypothetical protein ARALYDRAFT_477820 [Arabidopsis lyrata subsp.
           lyrata] gi|297330341|gb|EFH60760.1| hypothetical protein
           ARALYDRAFT_477820 [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/116 (58%), Positives = 80/116 (68%)
 Frame = -2

Query: 348 LNCKDARFFNRYTACRCLSLLFIALVLRAXXXXXXXXXXXXXXXXFDWIHISSFLSPLEN 169
           L+CK+ R F++  AC+CL L+ IAL  RA                F   H+S   S    
Sbjct: 5   LSCKNLRVFSKSVACKCLVLVGIALFYRALLLSYSPRNALSNSLLFRARHMSD--SSSTG 62

Query: 168 GVRKDKYLEVPQIVWGLNNQKIAFARACLTARMLNRTLLMPNLSASLFYKEVDLLQ 1
           G+R DK+LEVPQIVWGLNNQKIAFARACLTARM+NRTLLMP+LSASLFYKEVD L+
Sbjct: 63  GIRTDKFLEVPQIVWGLNNQKIAFARACLTARMMNRTLLMPSLSASLFYKEVDKLR 118


>ref|NP_187183.3| O-fucosyltransferase family protein [Arabidopsis thaliana]
           gi|6729042|gb|AAF27038.1|AC009177_28 unknown protein
           [Arabidopsis thaliana] gi|332640698|gb|AEE74219.1|
           O-fucosyltransferase family protein [Arabidopsis
           thaliana]
          Length = 445

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/116 (57%), Positives = 79/116 (68%)
 Frame = -2

Query: 348 LNCKDARFFNRYTACRCLSLLFIALVLRAXXXXXXXXXXXXXXXXFDWIHISSFLSPLEN 169
           L+ K+ R F++  AC+CL L+ IAL  RA                F   H+S   S    
Sbjct: 5   LSSKNLRIFSKSVACKCLVLVGIALFYRALLLSYSPRNALSNSLLFRDRHMSD--SSSTG 62

Query: 168 GVRKDKYLEVPQIVWGLNNQKIAFARACLTARMLNRTLLMPNLSASLFYKEVDLLQ 1
           G+R DK+LEVPQIVWGLNNQKIAFARACLTARM+NRTLLMP+LSASLFYKEVD L+
Sbjct: 63  GIRTDKFLEVPQIVWGLNNQKIAFARACLTARMMNRTLLMPSLSASLFYKEVDKLR 118


>ref|XP_002273827.1| PREDICTED: uncharacterized protein LOC100252719 [Vitis vinifera]
          Length = 427

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/103 (60%), Positives = 72/103 (69%)
 Frame = -2

Query: 309 ACRCLSLLFIALVLRAXXXXXXXXXXXXXXXXFDWIHISSFLSPLENGVRKDKYLEVPQI 130
           A +C++L  IALV RA                F  I+  S  S  E  +RK+K+LEVPQI
Sbjct: 2   AGKCVALFVIALVFRAAMLPTFSGFGEVAQNSFRVINKGSLSSDSELQMRKNKFLEVPQI 61

Query: 129 VWGLNNQKIAFARACLTARMLNRTLLMPNLSASLFYKEVDLLQ 1
           VWGLNNQKIAFARACLTARM+ RTLLMP+LSASLFYKE+DLLQ
Sbjct: 62  VWGLNNQKIAFARACLTARMMKRTLLMPSLSASLFYKEIDLLQ 104


>ref|XP_003534761.1| PREDICTED: uncharacterized protein LOC100785035 [Glycine max]
          Length = 438

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
 Frame = -2

Query: 303 RCLSLLFIALVLRAXXXXXXXXXXXXXXXXFDWIHISSFLSPLEN---GVRKDKYLEVPQ 133
           +C+ LL   L+LRA                 +W ++    +PL N   G+R+DK+L VPQ
Sbjct: 14  KCMVLLVTVLILRALLFASFPGFGGI-----EWGNLVYLRAPLLNFDFGIRQDKFLVVPQ 68

Query: 132 IVWGLNNQKIAFARACLTARMLNRTLLMPNLSASLFYKEVDLLQ 1
           +VWGLNNQKIAFARACLTAR+LNRTLLMP+LSASLFYKE+DLLQ
Sbjct: 69  LVWGLNNQKIAFARACLTARLLNRTLLMPSLSASLFYKEIDLLQ 112


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