BLASTX nr result

ID: Cimicifuga21_contig00038263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038263
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268731.1| PREDICTED: uncharacterized protein LOC100255...    72   6e-11
ref|XP_002266819.1| PREDICTED: uncharacterized protein LOC100242...    69   4e-10
emb|CBI28485.3| unnamed protein product [Vitis vinifera]               67   1e-09
gb|AFW72061.1| ATFP4 [Zea mays]                                        66   3e-09
ref|NP_001152411.1| ATFP4 [Zea mays] gi|195656017|gb|ACG47476.1|...    66   3e-09

>ref|XP_002268731.1| PREDICTED: uncharacterized protein LOC100255094 [Vitis vinifera]
          Length = 124

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
 Frame = +2

Query: 2   QKVAIKVPSD---KSRTKAMEIAATVPGVIAVELQGDNKNQFVVTDESTDSNRLTMVIRK 172
           QK+ I+VP +   K R+KAM+ A  VPGV ++ L+G++KNQ VV  +S DS  LT ++RK
Sbjct: 3   QKMVIRVPMNGEKKCRSKAMQTAVGVPGVESIALEGEDKNQIVVIGDSVDSVNLTCLLRK 62

Query: 173 EVGFAEVVCVTPVTEKNQEAENCPP 247
           + G AE++ V+ V+EK Q+     P
Sbjct: 63  KFGSAELLSVSAVSEKKQKENMTEP 87


>ref|XP_002266819.1| PREDICTED: uncharacterized protein LOC100242530 [Vitis vinifera]
          Length = 118

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 18/118 (15%)
 Frame = +2

Query: 2   QKVAIKVP--SDKSRTKAMEIAATVPGVIAVELQGDNKNQFVVTDESTDSNRLTMVIRKE 175
           +K+ IKV    +KSR+K++++A  V GV +  LQG  KNQ  V  E  D+  LT ++RK+
Sbjct: 3   KKMVIKVTMNGEKSRSKSLKVAVGVAGVESAALQGQEKNQIEVIGEGIDAVALTTLLRKK 62

Query: 176 VGFAEVVCVTPVTEK------NQEAENCP----------PQMHWFEDLDPLRDSCTLM 301
           VGFAE+V V+ V EK      NQ  +N P          P  H + D  P  DSC++M
Sbjct: 63  VGFAELVSVSVVGEKKEEKKDNQGKKNEPSLHVYMPSIEPYYHEYTDSHP--DSCSIM 118


>emb|CBI28485.3| unnamed protein product [Vitis vinifera]
          Length = 213

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 18/118 (15%)
 Frame = +2

Query: 2   QKVAIKVP--SDKSRTKAMEIAATVPGVIAVELQGDNKNQFVVTDESTDSNRLTMVIRKE 175
           +K+ IKV    +KSR+K++++A  V GV +  LQG  KNQ  V  E  D+  LT ++RK+
Sbjct: 37  KKMVIKVTMNGEKSRSKSLKVAVGVAGVESAALQGQEKNQIEVIGEGIDAVALTTLLRKK 96

Query: 176 VGFAEVVCVTPVTEK------NQEAENCP----------PQMHWFEDLDPLRDSCTLM 301
           VGFAE+V V+ V EK      NQ  +N P          P  H + D  P  DSC+++
Sbjct: 97  VGFAELVSVSVVGEKKEEKKDNQGKKNEPSLHVYMPSIEPYYHEYTDSHP--DSCSII 152


>gb|AFW72061.1| ATFP4 [Zea mays]
          Length = 122

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   QKVAIKVP--SDKSRTKAMEIAATVPGVIAVELQGDNKNQFVVTDESTDSNRLTMVIRKE 175
           QK+ IKVP  SDKSR+KAM + A   GV +V + GD K+Q VV  E  DS +LT ++RK+
Sbjct: 4   QKIVIKVPMASDKSRSKAMALVAAAGGVNSVAIAGDGKDQVVVVGEGVDSIKLTTILRKK 63

Query: 176 VGFAEVVCVTPVTEKNQE 229
           +G A++V V    +K ++
Sbjct: 64  MGDAQLVEVAEDKKKEEK 81


>ref|NP_001152411.1| ATFP4 [Zea mays] gi|195656017|gb|ACG47476.1| ATFP4 [Zea mays]
          Length = 122

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   QKVAIKVP--SDKSRTKAMEIAATVPGVIAVELQGDNKNQFVVTDESTDSNRLTMVIRKE 175
           QK+ IKVP  SDKSR+KAM + A   GV +V + GD K+Q VV  E  DS +LT ++RK+
Sbjct: 4   QKIVIKVPMASDKSRSKAMALVAAAGGVNSVAIAGDGKDQVVVVGEGVDSIKLTTILRKK 63

Query: 176 VGFAEVVCVTPVTEKNQE 229
           +G A++V V    +K ++
Sbjct: 64  MGDAQLVEVAEDKKKEEK 81


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