BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038217
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    79   5e-13
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    79   5e-13
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...    78   7e-13
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    78   7e-13
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]    78   7e-13

>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = +3

Query: 3   HTIRTN---KKKHGLMAIKIDMSKAFDRVNWNSLLEMMGKLGFDRQFCNIISKCISSVNF 173
           H +RTN   KKK+  MAIK DMSKA+DRV W+ L  +M K+GF +++ + I  CISSV++
Sbjct: 139 HALRTNPACKKKY--MAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSY 196

Query: 174 SILLNGSPEGCFKSTRGL 227
            ILLNGSP+G  K +RG+
Sbjct: 197 KILLNGSPKGFIKPSRGI 214


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = +3

Query: 3   HTIRTN---KKKHGLMAIKIDMSKAFDRVNWNSLLEMMGKLGFDRQFCNIISKCISSVNF 173
           H +RTN   KKK+  MAIK DMSKA+DRV W+ L  +M K+GF +++ + I  CISSV++
Sbjct: 505 HALRTNPACKKKY--MAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSY 562

Query: 174 SILLNGSPEGCFKSTRGL 227
            ILLNGSP+G  K +RG+
Sbjct: 563 KILLNGSPKGFIKPSRGI 580


>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/63 (53%), Positives = 48/63 (76%)
 Frame = +3

Query: 39  MAIKIDMSKAFDRVNWNSLLEMMGKLGFDRQFCNIISKCISSVNFSILLNGSPEGCFKST 218
           + +K+D+ KAFD VNWN L+E+M K+GF  ++ N I  C S+ +FSIL+NGSP G F+S+
Sbjct: 578 LLLKMDIEKAFDHVNWNFLMEVMSKMGFGHRWINWIKWCCSTTSFSILINGSPSGFFRSS 637

Query: 219 RGL 227
           RGL
Sbjct: 638 RGL 640


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/63 (53%), Positives = 49/63 (77%)
 Frame = +3

Query: 39   MAIKIDMSKAFDRVNWNSLLEMMGKLGFDRQFCNIISKCISSVNFSILLNGSPEGCFKST 218
            + +K+D+ KAFD VNW+ L+ +M K+GF +++ N IS CIS+ NFSIL+NG+P   F+ST
Sbjct: 1285 LLLKLDIEKAFDHVNWDCLVSVMSKMGFGQKWINWISWCISTTNFSILINGTPSDFFRST 1344

Query: 219  RGL 227
            RGL
Sbjct: 1345 RGL 1347



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/63 (53%), Positives = 48/63 (76%)
 Frame = +3

Query: 39   MAIKIDMSKAFDRVNWNSLLEMMGKLGFDRQFCNIISKCISSVNFSILLNGSPEGCFKST 218
            + +K+D+ KAFD VNWN L+E+M K+GF  ++ N I  C S+ +FSIL+NGSP G F+S+
Sbjct: 2979 LLLKMDIEKAFDHVNWNFLMEVMSKMGFGHRWINWIKWCCSTTSFSILINGSPSGFFRSS 3038

Query: 219  RGL 227
            RGL
Sbjct: 3039 RGL 3041


>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
          Length = 1728

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/63 (53%), Positives = 48/63 (76%)
 Frame = +3

Query: 39  MAIKIDMSKAFDRVNWNSLLEMMGKLGFDRQFCNIISKCISSVNFSILLNGSPEGCFKST 218
           + +K+D+ KAFD VNWN L+E+M K+GF  ++ N I  C S+ +FSIL+NGSP G F+S+
Sbjct: 659 LLLKMDIEKAFDHVNWNFLMEVMSKMGFGHRWINWIKWCCSTTSFSILINGSPSGFFRSS 718

Query: 219 RGL 227
           RGL
Sbjct: 719 RGL 721