BLASTX nr result

ID: Cimicifuga21_contig00038205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038205
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, parti...   168   4e-40
tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea m...   168   4e-40
ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-39
ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [S...   164   7e-39

>tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
          Length = 635

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/113 (70%), Positives = 88/113 (77%)
 Frame = -3

Query: 341 MPRRDVWSWNVMICGLATHGLAKEAXXXXXXXXXEGFCPVNVTFVGVLNACSRAGLVDEG 162
           MPRRDV++WN MICGLATHGL  +A         EGFCP ++TFVGVLNACSR GLVDEG
Sbjct: 326 MPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEG 385

Query: 161 RRYFKLMTETYKIEPEMEHFGCMVDLLGRAGFVAEALELIEKMEVQADPVLWG 3
           RRYFKLM E Y IE EMEH+GCMVDLL RAG V EA+ELIE M +  DPVLWG
Sbjct: 386 RRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWG 438


>tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
          Length = 637

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/113 (70%), Positives = 88/113 (77%)
 Frame = -3

Query: 341 MPRRDVWSWNVMICGLATHGLAKEAXXXXXXXXXEGFCPVNVTFVGVLNACSRAGLVDEG 162
           MPRRDV++WN MICGLATHGL  +A         EGFCP ++TFVGVLNACSR GLVDEG
Sbjct: 326 MPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEG 385

Query: 161 RRYFKLMTETYKIEPEMEHFGCMVDLLGRAGFVAEALELIEKMEVQADPVLWG 3
           RRYFKLM E Y IE EMEH+GCMVDLL RAG V EA+ELIE M +  DPVLWG
Sbjct: 386 RRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWG 438


>ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Brachypodium distachyon]
          Length = 635

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/113 (68%), Positives = 90/113 (79%)
 Frame = -3

Query: 341 MPRRDVWSWNVMICGLATHGLAKEAXXXXXXXXXEGFCPVNVTFVGVLNACSRAGLVDEG 162
           MPRRDV++WN MICGLA+HGL ++A         EG  P ++TFVGVLNACSR GLV EG
Sbjct: 324 MPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEG 383

Query: 161 RRYFKLMTETYKIEPEMEHFGCMVDLLGRAGFVAEALELIEKMEVQADPVLWG 3
           RRYFKLM + Y+IEPEMEH+GCMVDLLGRAG V+EA+ELIE M +  DPVLWG
Sbjct: 384 RRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWG 436


>ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449479547|ref|XP_004155632.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 638

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/112 (67%), Positives = 88/112 (78%)
 Frame = -3

Query: 341 MPRRDVWSWNVMICGLATHGLAKEAXXXXXXXXXEGFCPVNVTFVGVLNACSRAGLVDEG 162
           MP +D WSWNVMICGLATHGL +EA         +GF PVNVTF+GVL ACSRAGLV EG
Sbjct: 327 MPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEG 386

Query: 161 RRYFKLMTETYKIEPEMEHFGCMVDLLGRAGFVAEALELIEKMEVQADPVLW 6
           + +FKLMT+TY IEPEMEH+GCMVDLL RAGFV +A+E+I +M    DPVLW
Sbjct: 387 KHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLW 438


>ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
           gi|241924880|gb|EER98024.1| hypothetical protein
           SORBIDRAFT_02g003670 [Sorghum bicolor]
          Length = 786

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/113 (69%), Positives = 86/113 (76%)
 Frame = -3

Query: 341 MPRRDVWSWNVMICGLATHGLAKEAXXXXXXXXXEGFCPVNVTFVGVLNACSRAGLVDEG 162
           MP RDV++WN MICGLATHGL  +A         EGFCP N+TFVGVLNACSR GLVDEG
Sbjct: 324 MPWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVGVLNACSRTGLVDEG 383

Query: 161 RRYFKLMTETYKIEPEMEHFGCMVDLLGRAGFVAEALELIEKMEVQADPVLWG 3
           R YFKLM E Y IE EMEH+GCMVDLL RAG V EA+ELIE M +  DPVLWG
Sbjct: 384 RWYFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIPPDPVLWG 436


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