BLASTX nr result

ID: Cimicifuga21_contig00038178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038178
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   133   2e-29
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   132   4e-29
ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   130   1e-28
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   124   8e-27

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/104 (67%), Positives = 78/104 (75%)
 Frame = +2

Query: 5    REDTLCTPSITTAAAESFESRITEYLKEQISSYFTDRLLKIVRDTIHHVKGINRPVNNAH 184
            R    CTPSIT AAAE FES ITEYLKEQISSYF D+LL+IVRDT+ H+KG+NR  N+  
Sbjct: 1973 RNGDSCTPSITAAAAEVFESHITEYLKEQISSYFADKLLRIVRDTVLHMKGMNRSENDQ- 2031

Query: 185  AYGVPQLAGSNVHSGNAALEFIKHVCAVLALDHNVQHDILVMRK 316
                        H+G+AALEFIKHVCAVLALD NVQHDILVMRK
Sbjct: 2032 ------------HTGDAALEFIKHVCAVLALDQNVQHDILVMRK 2063


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/104 (67%), Positives = 78/104 (75%)
 Frame = +2

Query: 5    REDTLCTPSITTAAAESFESRITEYLKEQISSYFTDRLLKIVRDTIHHVKGINRPVNNAH 184
            R    CTPSIT AAAE FES ITEYLKEQISSYF D+LL+IVRDT+ H+KG+NR  N+  
Sbjct: 2482 RNGDSCTPSITAAAAEVFESHITEYLKEQISSYFADKLLRIVRDTVLHMKGMNRSENDQ- 2540

Query: 185  AYGVPQLAGSNVHSGNAALEFIKHVCAVLALDHNVQHDILVMRK 316
                        H+G+AALEFIKHVCAVLALD NVQHDILVMRK
Sbjct: 2541 ------------HTGDAALEFIKHVCAVLALDQNVQHDILVMRK 2572


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/99 (66%), Positives = 81/99 (81%)
 Frame = +2

Query: 20   CTPSITTAAAESFESRITEYLKEQISSYFTDRLLKIVRDTIHHVKGINRPVNNAHAYGVP 199
            CTPSIT +AAE++ES I EYLK QIS+YFTD+LL IVR+T+ H+KGIN+  N+  + G P
Sbjct: 1979 CTPSITISAAETYESHIVEYLKGQISTYFTDKLLGIVRETVLHMKGINKSENDQPSSGFP 2038

Query: 200  QLAGSNVHSGNAALEFIKHVCAVLALDHNVQHDILVMRK 316
            Q+AG N+H    ALEFIKHVCAVLALD NVQH++LVMRK
Sbjct: 2039 QVAG-NIHKRVPALEFIKHVCAVLALDLNVQHEVLVMRK 2076


>ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Glycine max]
          Length = 2205

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/99 (64%), Positives = 79/99 (79%)
 Frame = +2

Query: 20   CTPSITTAAAESFESRITEYLKEQISSYFTDRLLKIVRDTIHHVKGINRPVNNAHAYGVP 199
            CTPSI   AAE+FES +TE+ K+QISSYFT +LL IV D   H+KG+NR  NN    G+P
Sbjct: 1957 CTPSINIGAAEAFESEVTEFTKDQISSYFTHKLLGIVHDIGLHMKGMNRSENNQSTSGLP 2016

Query: 200  QLAGSNVHSGNAALEFIKHVCAVLALDHNVQHDILVMRK 316
            QL G +VH G+A+LEFIKHVCAVLALDH+VQH++LV+RK
Sbjct: 2017 QLTG-DVHRGDASLEFIKHVCAVLALDHSVQHEVLVLRK 2054


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/99 (63%), Positives = 76/99 (76%)
 Frame = +2

Query: 20   CTPSITTAAAESFESRITEYLKEQISSYFTDRLLKIVRDTIHHVKGINRPVNNAHAYGVP 199
            CTPSI   AAE+FES ITE+ KEQI SYFT +LL IV D   H+KG+NR  NN    G+P
Sbjct: 1959 CTPSINIGAAEAFESEITEFTKEQIGSYFTHKLLGIVHDIGLHMKGMNRLENNQSTSGLP 2018

Query: 200  QLAGSNVHSGNAALEFIKHVCAVLALDHNVQHDILVMRK 316
             L G +VH G+A+LEFIKHVCAVLALD +VQH++LV+RK
Sbjct: 2019 PLTG-DVHRGDASLEFIKHVCAVLALDQSVQHEVLVLRK 2056


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