BLASTX nr result

ID: Cimicifuga21_contig00038146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038146
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE93486.1| cytochrome b6/f complex subunit IV [Xiphidium cae...   206   2e-51
ref|YP_007476078.1| cytochrome b6/f complex subunit IV [Dasypogo...   206   2e-51
ref|YP_007475650.1| cytochrome b6/f complex subunit IV [Heliconi...   206   2e-51
ref|YP_007375074.1| cytochrome b6/f complex subunit IV [Quercus ...   206   2e-51
gb|AFM83324.1| cytochrome b6/f complex subunit IV (chloroplast) ...   206   2e-51

>gb|AGE93486.1| cytochrome b6/f complex subunit IV [Xiphidium caeruleum]
          Length = 162

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = -1

Query: 298 MGVTKKPDLNDSVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 119
           MGVTKKPDLND VLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 118 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 2
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 99


>ref|YP_007476078.1| cytochrome b6/f complex subunit IV [Dasypogon bromeliifolius]
           gi|449326561|gb|AGE93142.1| cytochrome b6/f complex
           subunit IV [Dasypogon bromeliifolius]
           gi|449326648|gb|AGE93228.1| cytochrome b6/f complex
           subunit IV [Calectasia narragara]
          Length = 160

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = -1

Query: 298 MGVTKKPDLNDSVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 119
           MGVTKKPDLND VLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 118 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 2
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 99


>ref|YP_007475650.1| cytochrome b6/f complex subunit IV [Heliconia collinsiana]
           gi|449326128|gb|AGE92714.1| cytochrome b6/f complex
           subunit IV [Heliconia collinsiana]
          Length = 160

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = -1

Query: 298 MGVTKKPDLNDSVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 119
           MGVTKKPDLND VLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 118 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 2
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 99


>ref|YP_007375074.1| cytochrome b6/f complex subunit IV [Quercus rubra]
           gi|441421953|gb|AGC31277.1| cytochrome b6/f complex
           subunit IV [Quercus rubra]
          Length = 167

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = -1

Query: 298 MGVTKKPDLNDSVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 119
           MGVTKKPDLND VLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 118 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 2
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 99


>gb|AFM83324.1| cytochrome b6/f complex subunit IV (chloroplast) [Kingia australis]
           gi|449326735|gb|AGE93314.1| cytochrome b6/f complex
           subunit IV [Chamaedorea seifrizii]
          Length = 160

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = -1

Query: 298 MGVTKKPDLNDSVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 119
           MGVTKKPDLND VLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 118 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 2
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVL 99


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