BLASTX nr result

ID: Cimicifuga21_contig00038121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038121
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74321.1| hypothetical protein VITISV_008594 [Vitis vinifera]   121   7e-26
emb|CBI22976.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002336041.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002270712.1| PREDICTED: uncharacterized protein LOC100256...    99   3e-19
ref|XP_003611996.1| hypothetical protein MTR_5g020150 [Medicago ...    91   7e-17

>emb|CAN74321.1| hypothetical protein VITISV_008594 [Vitis vinifera]
          Length = 1176

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/123 (53%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
 Frame = -3

Query: 384  MSVPLFREATINLIRRRPMSSLVAHTLGSAIVXXXXXXXXXXXXXXXFTCKCALVLGNER 205
            +S+PLF EA++NLIRR PMSSLVAHTLGSAIV               FTC+CA+VL NER
Sbjct: 1016 ISMPLFTEASVNLIRRSPMSSLVAHTLGSAIVVEFVVVFFLGVLLLFFTCRCAIVLINER 1075

Query: 204  RGHT-RDSKLSKADNSQEPASSETLSENVTQFTGCCSSPFLLRSRPSNFRQRSRRQSVNG 28
            R    ++ +LSK  +  +P  +  LS + T FTGCC S  LL  RPSNF QRS   S NG
Sbjct: 1076 RSRDIKNIRLSKVSSLHKPTPNTDLSTDATYFTGCCPSRLLLTGRPSNFHQRSHHHSRNG 1135

Query: 27   DSG 19
            DSG
Sbjct: 1136 DSG 1138


>emb|CBI22976.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  120 bits (302), Expect = 9e-26
 Identities = 66/123 (53%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
 Frame = -3

Query: 384  MSVPLFREATINLIRRRPMSSLVAHTLGSAIVXXXXXXXXXXXXXXXFTCKCALVLGNER 205
            +S+PLF EA++NLIRR PMSSLVAHTLGSAIV               FTC+CA+VL NER
Sbjct: 1001 ISMPLFTEASVNLIRRSPMSSLVAHTLGSAIVVEFVVVFFLGVLLLFFTCRCAIVLINER 1060

Query: 204  RG-HTRDSKLSKADNSQEPASSETLSENVTQFTGCCSSPFLLRSRPSNFRQRSRRQSVNG 28
            R    ++ +LSK  +  +P  +  LS +VT FTGCC S  LL  RPS+F QRS   S NG
Sbjct: 1061 RSCDVKNIRLSKVSSLHKPTPNTDLSTDVTYFTGCCPSRLLLTGRPSDFHQRSHHHSRNG 1120

Query: 27   DSG 19
            DSG
Sbjct: 1121 DSG 1123


>ref|XP_002336041.1| predicted protein [Populus trichocarpa] gi|222839764|gb|EEE78087.1|
            predicted protein [Populus trichocarpa]
          Length = 1174

 Score =  110 bits (274), Expect = 2e-22
 Identities = 62/127 (48%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
 Frame = -3

Query: 384  MSVPLFREATINLIRRRPMSSLVAHTLGSAIVXXXXXXXXXXXXXXXFTCKCALVLGNER 205
            ++VPL  EAT+ LIRRR MSSL+AHTLGSAI+               FTCKCA+ L NER
Sbjct: 1021 IAVPLHAEATVQLIRRRSMSSLLAHTLGSAILVEFLMVFSLGGILLFFTCKCAMHLANER 1080

Query: 204  RG-HTRDSKLSKADNSQEPASSETLSENVTQFTGCCSSPFLLRSRPSNFRQRSRRQSVNG 28
            R    ++S+LS   NSQ+ +     S+++T FT CCSSPFLL  + SNFRQRS ++    
Sbjct: 1081 RRISVKNSQLSSVQNSQKKSQYTDFSKDMTNFTCCCSSPFLLSGQTSNFRQRSNQRLRVE 1140

Query: 27   DSGKDES 7
            ++GK+ S
Sbjct: 1141 ETGKNIS 1147


>ref|XP_002270712.1| PREDICTED: uncharacterized protein LOC100256778 [Vitis vinifera]
          Length = 1011

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
 Frame = -3

Query: 384  MSVPLFREATINLIRRRPMSSLVAHTLGSAIVXXXXXXXXXXXXXXXFTCKCALVLGNER 205
            +S+PLF EA++NLIRR PMSSLVAHT+   +                   +CA+VL NER
Sbjct: 860  ISMPLFTEASVNLIRRSPMSSLVAHTVHEILKFLSFVQQQE---------QCAIVLINER 910

Query: 204  RG-HTRDSKLSKADNSQEPASSETLSENVTQFTGCCSSPFLLRSRPSNFRQRSRRQSVNG 28
            R    ++ +LSK  +  +P  +  LS +VT FTGCC S  LL  RPS+F QRS   S NG
Sbjct: 911  RSCDVKNIRLSKVSSLHKPTPNTDLSTDVTYFTGCCPSRLLLTGRPSDFHQRSHHHSRNG 970

Query: 27   DSG 19
            DSG
Sbjct: 971  DSG 973


>ref|XP_003611996.1| hypothetical protein MTR_5g020150 [Medicago truncatula]
           gi|355513331|gb|AES94954.1| hypothetical protein
           MTR_5g020150 [Medicago truncatula]
          Length = 472

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/116 (46%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = -3

Query: 384 MSVPLFREATINLIRRRPMSSLVAHTLGSAIVXXXXXXXXXXXXXXXFTCKCALVLGNER 205
           MS+ L+ EA +NL+R++PM S +AHTLG+ IV               FTCKCA++L +ER
Sbjct: 342 MSMQLYTEAIVNLMRKQPMDSFLAHTLGTIIVIEFVIIFCLGLLLLYFTCKCAILLVHER 401

Query: 204 R-GHTRDSKLSKADNSQEPASSETLSENVTQFTGCCSSPFLLRSRPS--NFRQRSR 46
           R    R S+ S   +S+   SS T+ EN T FTGCC    LLR R    NFRQRSR
Sbjct: 402 RKNEKRTSEASTDQSSEGQTSSMTIPENATNFTGCCWISSLLRFRMQSFNFRQRSR 457


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