BLASTX nr result

ID: Cimicifuga21_contig00038105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038105
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]...    92   4e-17
ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease ...    86   3e-15
ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-...    85   5e-15
emb|CBI32833.3| unnamed protein product [Vitis vinifera]               84   2e-14
emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]    84   2e-14

>ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 211

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/68 (66%), Positives = 54/68 (79%)
 Frame = +3

Query: 6   GVGIEEDIEKLLLDYNLRVANTVDLRPLAVQKLQMKELRNAGLKILAKQVLDMEIQKPKR 185
           GVGIE D+EKL+ DY L V N ++LR +A + L +KEL+NAGLK L KQVL  EIQKPKR
Sbjct: 114 GVGIESDVEKLVEDYGLSVGNVMELRRVAAESLGVKELKNAGLKELVKQVLGKEIQKPKR 173

Query: 186 VTMSRWDA 209
           VTMSRWD+
Sbjct: 174 VTMSRWDS 181


>ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease [Vitis vinifera]
          Length = 213

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/68 (61%), Positives = 53/68 (77%)
 Frame = +3

Query: 3   VGVGIEEDIEKLLLDYNLRVANTVDLRPLAVQKLQMKELRNAGLKILAKQVLDMEIQKPK 182
           VGVGI++D+EKL+ D+ L V+N VDLR LA  +L   ELRNAGLK L  +VL  E+QKP+
Sbjct: 115 VGVGIDDDLEKLVGDHGLGVSNAVDLRGLAAHELNKMELRNAGLKRLGLEVLGKEVQKPR 174

Query: 183 RVTMSRWD 206
           RVT+SRWD
Sbjct: 175 RVTLSRWD 182


>ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
          Length = 238

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = +3

Query: 3   VGVGIEEDIEKLLLDYNLRVANTVDLRPLAVQKLQMKELRNAGLKILAKQVLDMEIQKPK 182
           VGVGI+ED+EKLL DYNL VAN  DLR  A ++L   EL+ AGLK L  +VL +E+ KPK
Sbjct: 141 VGVGIQEDMEKLLEDYNLNVANVRDLRSFAAERLGDLELKRAGLKSLGLRVLGLEVAKPK 200

Query: 183 RVTMSRWD 206
           RVT SRWD
Sbjct: 201 RVTRSRWD 208


>emb|CBI32833.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/68 (60%), Positives = 51/68 (75%)
 Frame = +3

Query: 3   VGVGIEEDIEKLLLDYNLRVANTVDLRPLAVQKLQMKELRNAGLKILAKQVLDMEIQKPK 182
           VGVGI+ D +KLL D+NLRV N VDL  LA + L  +ELRNAG+K LA++VL  E++KPK
Sbjct: 110 VGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGIKRLAREVLGREVEKPK 169

Query: 183 RVTMSRWD 206
            V  SRWD
Sbjct: 170 HVARSRWD 177


>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/68 (60%), Positives = 51/68 (75%)
 Frame = +3

Query: 3   VGVGIEEDIEKLLLDYNLRVANTVDLRPLAVQKLQMKELRNAGLKILAKQVLDMEIQKPK 182
           VGVGI+ D +KLL D+NLRV N VDL  LA + L  +ELRNAG+K LA++VL  E++KPK
Sbjct: 110 VGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGIKRLAREVLGREVEKPK 169

Query: 183 RVTMSRWD 206
            V  SRWD
Sbjct: 170 HVARSRWD 177


Top