BLASTX nr result

ID: Cimicifuga21_contig00038088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038088
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544945.1| PREDICTED: cytochrome b-c1 complex subunit 8...   107   1e-21
ref|XP_003519298.1| PREDICTED: cytochrome b-c1 complex subunit 8...   104   7e-21
ref|XP_002319981.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|XP_002533341.1| Ubiquinol-cytochrome c reductase complex ubi...   102   3e-20
ref|XP_002325629.1| predicted protein [Populus trichocarpa] gi|1...   101   7e-20

>ref|XP_003544945.1| PREDICTED: cytochrome b-c1 complex subunit 8-like [Glycine max]
          Length = 72

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = -2

Query: 269 FQQKVMSGLWKGIPDKIHHKVSENWLSATLLLGPLVGVYAYVQNYLEKEKLAHRY 105
           FQQK+M GLWK +P KIHHKVSENW+SATLLLGPLVG YAYVQNYLEKEKLAHRY
Sbjct: 18  FQQKIMPGLWKDLPTKIHHKVSENWISATLLLGPLVGTYAYVQNYLEKEKLAHRY 72


>ref|XP_003519298.1| PREDICTED: cytochrome b-c1 complex subunit 8 [Glycine max]
          Length = 72

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -2

Query: 269 FQQKVMSGLWKGIPDKIHHKVSENWLSATLLLGPLVGVYAYVQNYLEKEKLAHRY 105
           FQQK+M GLWK +P KIHHKVSENW+SATLLLGPLVG Y YVQNYLEKEKL+HRY
Sbjct: 18  FQQKIMPGLWKDLPTKIHHKVSENWISATLLLGPLVGTYTYVQNYLEKEKLSHRY 72


>ref|XP_002319981.1| predicted protein [Populus trichocarpa] gi|222858357|gb|EEE95904.1|
           predicted protein [Populus trichocarpa]
          Length = 72

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = -2

Query: 269 FQQKVMSGLWKGIPDKIHHKVSENWLSATLLLGPLVGVYAYVQNYLEKEKLAHRY 105
           FQQKVM GLWK +P KIHHKVSENW+SATLLLGPLVGVY YVQNY EKEKL+HRY
Sbjct: 18  FQQKVMPGLWKDLPGKIHHKVSENWISATLLLGPLVGVYTYVQNYQEKEKLSHRY 72


>ref|XP_002533341.1| Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein
           QP-C, putative [Ricinus communis]
           gi|223526821|gb|EEF29040.1| Ubiquinol-cytochrome c
           reductase complex ubiquinone-binding protein QP-C,
           putative [Ricinus communis]
          Length = 92

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = -2

Query: 269 FQQKVMSGLWKGIPDKIHHKVSENWLSATLLLGPLVGVYAYVQNYLEKEKLAHR 108
           FQQKVM+GLWK +PDKIHHKVSENW+SATLLL PLVGVY+YVQNY EKEKL HR
Sbjct: 11  FQQKVMTGLWKDLPDKIHHKVSENWISATLLLAPLVGVYSYVQNYQEKEKLEHR 64


>ref|XP_002325629.1| predicted protein [Populus trichocarpa] gi|118484575|gb|ABK94161.1|
           unknown [Populus trichocarpa]
           gi|118487047|gb|ABK95354.1| unknown [Populus
           trichocarpa] gi|222862504|gb|EEF00011.1| predicted
           protein [Populus trichocarpa]
          Length = 72

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/55 (83%), Positives = 48/55 (87%)
 Frame = -2

Query: 269 FQQKVMSGLWKGIPDKIHHKVSENWLSATLLLGPLVGVYAYVQNYLEKEKLAHRY 105
           FQQKVM GLWK +P KIHHKVSENW+SATLLL PLVGVY YVQNY EKEKL HRY
Sbjct: 18  FQQKVMPGLWKDLPGKIHHKVSENWISATLLLAPLVGVYTYVQNYQEKEKLEHRY 72


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