BLASTX nr result

ID: Cimicifuga21_contig00038087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038087
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   139   2e-31
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   127   7e-28
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          127   9e-28
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   127   1e-27
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]   117   1e-24

>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  139 bits (351), Expect = 2e-31
 Identities = 60/93 (64%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = +2

Query: 8   LGSIHME-LCTLINLEFIPKFKIDLNYKCQTCIEAKMTRTSFHPVEQKTEPLDLVHTDVC 184
           LG ++ + LC LI+L+++PKF ID N+KC+TC+E+K+T+  FH VE+ TEPLDL H+D+C
Sbjct: 606 LGHVNYDTLCRLIHLDYLPKFNIDPNHKCETCVESKLTKVPFHSVERSTEPLDLFHSDIC 665

Query: 185 DLKMCQTREGKKYFVTFIDDCTRYCYEYLLRSK 283
           DLK  QTR GKKYF+TFIDDCTRYCY YLL+SK
Sbjct: 666 DLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSK 698


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/93 (61%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = +2

Query: 8   LGSIHME-LCTLINLEFIPKFKIDLNYKCQTCIEAKMTRTSFHPVEQKTEPLDLVHTDVC 184
           LG ++ + L  LINL  IP F+I+ N+KC+TC+EAK+TR+SF  VE+ TEPLDL+H+D+C
Sbjct: 477 LGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDIC 536

Query: 185 DLKMCQTREGKKYFVTFIDDCTRYCYEYLLRSK 283
           DLK  QTR G KYF+TF+DD T+YCY YLL+SK
Sbjct: 537 DLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSK 569


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  127 bits (319), Expect = 9e-28
 Identities = 55/93 (59%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = +2

Query: 8   LGSIHME-LCTLINLEFIPKFKIDLNYKCQTCIEAKMTRTSFHPVEQKTEPLDLVHTDVC 184
           LG ++   L  LIN++ IP F+IDL +KC+TC+EAK+TR+SF  +++ +EPLDL+H+D+C
Sbjct: 466 LGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLTRSSFQIIQRNSEPLDLIHSDIC 525

Query: 185 DLKMCQTREGKKYFVTFIDDCTRYCYEYLLRSK 283
           D K  QTR G KYF+TFIDDCT+YCY YLL+SK
Sbjct: 526 DFKSIQTRGGNKYFITFIDDCTKYCYVYLLKSK 558


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  127 bits (318), Expect = 1e-27
 Identities = 54/82 (65%), Positives = 69/82 (84%)
 Frame = +2

Query: 38  LINLEFIPKFKIDLNYKCQTCIEAKMTRTSFHPVEQKTEPLDLVHTDVCDLKMCQTREGK 217
           LINL  IP F+I+ N+KC+TC+EAK+TR+SF  VE+ TEPLDL+H+D+CDLK  QTR G 
Sbjct: 488 LINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRGGN 547

Query: 218 KYFVTFIDDCTRYCYEYLLRSK 283
           KYF+TF+DD T+YCY YLL+SK
Sbjct: 548 KYFITFVDDSTKYCYVYLLKSK 569


>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
          Length = 839

 Score =  117 bits (292), Expect = 1e-24
 Identities = 49/82 (59%), Positives = 61/82 (74%)
 Frame = +2

Query: 38  LINLEFIPKFKIDLNYKCQTCIEAKMTRTSFHPVEQKTEPLDLVHTDVCDLKMCQTREGK 217
           LIN+  +  F ID  +KC+ C+EAKM +  FH +E+ T+P DL+H D+CDLK  QTR GK
Sbjct: 285 LINMNLLHFFSIDFKHKCEVCVEAKMAKPPFHSIERNTKPPDLIHNDICDLKFVQTRGGK 344

Query: 218 KYFVTFIDDCTRYCYEYLLRSK 283
            YF+TFIDDC RYCY YLLRSK
Sbjct: 345 MYFITFIDDCIRYCYVYLLRSK 366


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