BLASTX nr result

ID: Cimicifuga21_contig00038058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038058
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...    98   6e-19
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...    97   1e-18
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from...    95   5e-18
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ...    95   5e-18

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/92 (61%), Positives = 70/92 (76%)
 Frame = +3

Query: 3   RVATLLLDGSVLDRSYQPHESHIPYLLQFLVDYNLYGMAHLHVSKVKFRYPLPDAFIPRA 182
           R A LLL GSVLD+S QPHESHIP+LLQFL+DYNLYGM HLH+SK+KFR+P+PD F  R 
Sbjct: 150 RAANLLLGGSVLDKSLQPHESHIPFLLQFLIDYNLYGMGHLHLSKMKFRHPVPDVFSSRK 209

Query: 183 AHQSGVHRHETEKLARTSANDQADSSGHYCLA 278
            + +G  + E +  A  SA+ QADSSG  CL+
Sbjct: 210 VNYNGQQKLEPDDFACISAHLQADSSGDTCLS 241


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +3

Query: 3   RVATLLLDGSVLDRSYQPHESHIPYLLQFLVDYNLYGMAHLHVSKVKFRYPLPDAFIPRA 182
           R A LLL G+VLD+S QP+ESHIP++LQFLVDYNLYGM HLH+SK+KFRYP+PD      
Sbjct: 111 RAANLLLAGAVLDKSLQPYESHIPFILQFLVDYNLYGMGHLHLSKMKFRYPIPDT----- 165

Query: 183 AHQSGVHRHETEKLARTSANDQADSSGHYCL 275
                      +KL     + +ADS  H CL
Sbjct: 166 ----------CKKLNTDDQHRKADSDAHACL 186


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
           lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
           ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +3

Query: 3   RVATLLLDGSVLDRSYQPHESHIPYLLQFLVDYNLYGMAHLHVSKVKFRYPLPDAFIPRA 182
           R A+LLL G+VL +S QP+ESHIP++LQFLVDYNLYGM H+H+SK+KFR P+P  F+PR 
Sbjct: 152 RAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMCHVHISKMKFRSPVPHHFLPRR 211

Query: 183 AHQSGVHRHETEKLARTSANDQADSS 260
                      +++A T AN  A +S
Sbjct: 212 FDLEDCAGQRIDEVAITKANSSAAAS 237


>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
           [Arabidopsis thaliana]
          Length = 1894

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/86 (53%), Positives = 60/86 (69%)
 Frame = +3

Query: 3   RVATLLLDGSVLDRSYQPHESHIPYLLQFLVDYNLYGMAHLHVSKVKFRYPLPDAFIPRA 182
           R A+LLL G+VL +S QP+ESHIP++LQFLVDYNLYGM H+H+SK+KFR P+P  F PR 
Sbjct: 152 RAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFRSPVPHHFRPRR 211

Query: 183 AHQSGVHRHETEKLARTSANDQADSS 260
                      +++A T AN  A +S
Sbjct: 212 FDLDDCPGQRIDEVAITKANSSAAAS 237


>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis
           thaliana]
          Length = 1871

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/86 (53%), Positives = 60/86 (69%)
 Frame = +3

Query: 3   RVATLLLDGSVLDRSYQPHESHIPYLLQFLVDYNLYGMAHLHVSKVKFRYPLPDAFIPRA 182
           R A+LLL G+VL +S QP+ESHIP++LQFLVDYNLYGM H+H+SK+KFR P+P  F PR 
Sbjct: 152 RAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFRSPVPHHFRPRR 211

Query: 183 AHQSGVHRHETEKLARTSANDQADSS 260
                      +++A T AN  A +S
Sbjct: 212 FDLDDCPGQRIDEVAITKANSSAAAS 237


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