BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038005
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21248.3| unnamed protein product [Vitis vinifera]              201   4e-50
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   201   4e-50
ref|XP_003553316.1| PREDICTED: transcription-repair-coupling fac...   196   1e-48
ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putativ...   195   3e-48
ref|XP_002303013.1| predicted protein [Populus trichocarpa] gi|2...   195   4e-48

>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  201 bits (512), Expect = 4e-50
 Identities = 99/110 (90%), Positives = 105/110 (95%)
 Frame = +3

Query: 3   RVKGKIAIQKMVVDLMELYLHRLKQKRPPHPKPPAMAEFAAQFLYEPTPDQKQAFIDVEK 182
           R+KG++AIQKMVVDLMELYLHRLKQKRPP+PK P MAEF AQF YEPTPDQKQAFIDVE+
Sbjct: 41  RIKGRVAIQKMVVDLMELYLHRLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVEE 100

Query: 183 DLTERETPMDRLICGDVGFGKTEVALRAIYSVVSAGKQAMVLAPTIVLAK 332
           DLTERETPMDRLICGDVGFGKTEVALRAI+ VVSAGKQAMVLAPTIVLAK
Sbjct: 101 DLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAK 150


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
           vinifera]
          Length = 823

 Score =  201 bits (512), Expect = 4e-50
 Identities = 99/110 (90%), Positives = 105/110 (95%)
 Frame = +3

Query: 3   RVKGKIAIQKMVVDLMELYLHRLKQKRPPHPKPPAMAEFAAQFLYEPTPDQKQAFIDVEK 182
           R+KG++AIQKMVVDLMELYLHRLKQKRPP+PK P MAEF AQF YEPTPDQKQAFIDVE+
Sbjct: 224 RIKGRVAIQKMVVDLMELYLHRLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVEE 283

Query: 183 DLTERETPMDRLICGDVGFGKTEVALRAIYSVVSAGKQAMVLAPTIVLAK 332
           DLTERETPMDRLICGDVGFGKTEVALRAI+ VVSAGKQAMVLAPTIVLAK
Sbjct: 284 DLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAK 333


>ref|XP_003553316.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 823

 Score =  196 bits (499), Expect = 1e-48
 Identities = 98/110 (89%), Positives = 105/110 (95%)
 Frame = +3

Query: 3   RVKGKIAIQKMVVDLMELYLHRLKQKRPPHPKPPAMAEFAAQFLYEPTPDQKQAFIDVEK 182
           +VKGK+AIQKMVVDLMELYLHRLKQ+RPP+PK PAMA+FAAQF YEPTPDQK+AFIDVE+
Sbjct: 224 KVKGKVAIQKMVVDLMELYLHRLKQRRPPYPKSPAMAKFAAQFRYEPTPDQKRAFIDVER 283

Query: 183 DLTERETPMDRLICGDVGFGKTEVALRAIYSVVSAGKQAMVLAPTIVLAK 332
           DLTERETPMDRLICGDVGFGKTEVALRAI  VVSA KQAMVLAPTIVLAK
Sbjct: 284 DLTERETPMDRLICGDVGFGKTEVALRAISCVVSAKKQAMVLAPTIVLAK 333


>ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547814|gb|EEF49306.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 857

 Score =  195 bits (496), Expect = 3e-48
 Identities = 98/110 (89%), Positives = 102/110 (92%)
 Frame = +3

Query: 3   RVKGKIAIQKMVVDLMELYLHRLKQKRPPHPKPPAMAEFAAQFLYEPTPDQKQAFIDVEK 182
           + KGKIAIQKMVVDLMELYLHRLKQ+RPP+PK P MAEF AQF YEPTPDQ QAF DVEK
Sbjct: 226 KTKGKIAIQKMVVDLMELYLHRLKQRRPPYPKSPVMAEFTAQFPYEPTPDQFQAFNDVEK 285

Query: 183 DLTERETPMDRLICGDVGFGKTEVALRAIYSVVSAGKQAMVLAPTIVLAK 332
           DLTERETPMDRLICGDVGFGKTEVALRAI+ VVSAGKQAMVLAPTIVLAK
Sbjct: 286 DLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAK 335


>ref|XP_002303013.1| predicted protein [Populus trichocarpa] gi|222844739|gb|EEE82286.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/110 (86%), Positives = 104/110 (94%)
 Frame = +3

Query: 3   RVKGKIAIQKMVVDLMELYLHRLKQKRPPHPKPPAMAEFAAQFLYEPTPDQKQAFIDVEK 182
           + KGK+AIQKMVVDLMELYLHRLKQ+RPP+PK PAM +F+AQF YEPTPDQKQAFIDV +
Sbjct: 220 KTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKTPAMVDFSAQFPYEPTPDQKQAFIDVMR 279

Query: 183 DLTERETPMDRLICGDVGFGKTEVALRAIYSVVSAGKQAMVLAPTIVLAK 332
           DLTERETPMDRLICGDVGFGKTEVALRAI+ VVSAGKQAMVLAPTIVLA+
Sbjct: 280 DLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAR 329