BLASTX nr result

ID: Cimicifuga21_contig00038000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038000
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    92   4e-17
ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...    88   8e-16
emb|CBI33855.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|NP_001237563.1| uncharacterized protein LOC100500662 [Glycin...    83   3e-14
ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
           gi|449525814|ref|XP_004169911.1| PREDICTED: E3
           ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 10/75 (13%)
 Frame = -1

Query: 389 AIQEWEEHMNDR----------LPENPRHQCPICRHMNSKVGNNNHVFCQSCRNHYCFLC 240
           AIQ+WEE MN R           PEN  H CP C  +N+KVGNNNH+ C SC+ HYC+LC
Sbjct: 558 AIQQWEERMNARQVLGQIQAELFPENG-HPCPNCGQLNAKVGNNNHIRCWSCQIHYCYLC 616

Query: 239 RKNVRRSTEHYGPNG 195
           RK V+RS++HYGP G
Sbjct: 617 RKVVKRSSQHYGPKG 631


>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 9/71 (12%)
 Frame = -1

Query: 380  EWEEHMNDR---------LPENPRHQCPICRHMNSKVGNNNHVFCQSCRNHYCFLCRKNV 228
            +WE  +N R         L  +  H CPICR +N KVGNNNH+FC SC++HYC+LC++ V
Sbjct: 791  DWEARLNQRQVVGQIQAELFADRGHSCPICRQINVKVGNNNHIFCWSCQSHYCYLCKEIV 850

Query: 227  RRSTEHYGPNG 195
            RRS++H+GP G
Sbjct: 851  RRSSQHFGPKG 861


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 9/71 (12%)
 Frame = -1

Query: 380 EWEEHMNDR---------LPENPRHQCPICRHMNSKVGNNNHVFCQSCRNHYCFLCRKNV 228
           +WE  +N R         L  +  H CPICR +N KVGNNNH+FC SC++HYC+LC++ V
Sbjct: 585 DWEARLNQRQVVGQIQAELFADRGHSCPICRQINVKVGNNNHIFCWSCQSHYCYLCKEIV 644

Query: 227 RRSTEHYGPNG 195
           RRS++H+GP G
Sbjct: 645 RRSSQHFGPKG 655


>ref|NP_001237563.1| uncharacterized protein LOC100500662 [Glycine max]
           gi|255630881|gb|ACU15803.1| unknown [Glycine max]
          Length = 181

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 9/73 (12%)
 Frame = -1

Query: 386 IQEWEEHMNDRLPEN-------PRH--QCPICRHMNSKVGNNNHVFCQSCRNHYCFLCRK 234
           +  WEE +N R           P+H   CP CR  N K+GNNNH+FC +C+ HYC+LC+ 
Sbjct: 102 VDSWEERINHRQAVGQLQAELFPQHGLACPSCRQYNPKIGNNNHLFCWACQRHYCYLCKA 161

Query: 233 NVRRSTEHYGPNG 195
            VRR T+HYGP G
Sbjct: 162 IVRRGTKHYGPKG 174


>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
 Frame = -1

Query: 386 IQEWEEHMNDRLPENPRHQ---------CPICRHMNSKVGNNNHVFCQSCRNHYCFLCRK 234
           IQ+WEE MN R      H          CP C   N KVGNNNH+ C SC+ HYC+LCRK
Sbjct: 563 IQQWEERMNPRRVVAEVHAELFPDHVNACPNCGQFNVKVGNNNHILCWSCQMHYCYLCRK 622

Query: 233 NVRRSTEHYGPNG 195
            VRR ++H+GP G
Sbjct: 623 IVRRGSQHFGPKG 635


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