BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037908
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79780.1| hypothetical protein VITISV_041885 [Vitis vinifera]   132   4e-29
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   129   2e-28
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]   125   4e-27
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   116   2e-24
dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   115   4e-24

>emb|CAN79780.1| hypothetical protein VITISV_041885 [Vitis vinifera]
          Length = 408

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   VKVTSSMYTILLLYVDDMILIGDNDAEISRLRDELSNRFEMKNLGETHSFLGLEILKTN- 181
           VK       I+L+YVDD+I+ GD+  EI R ++ LS RFEMK LG+   FLGLE+ +T+ 
Sbjct: 116 VKANGGKLAIVLVYVDDLIITGDDVEEICRTKENLSVRFEMKELGQLKHFLGLEVDRTHE 175

Query: 182 GYFVSQGSYATSLLNRFGMADSTSISTPMEPQLKLQKIEGELLDDATKYRQLVGSLFYLT 361
           G F+ Q  YA  LL +FGM +  SISTPMEP  K+ + EG+ L DAT YRQLVGSL YLT
Sbjct: 176 GIFLCQQKYAKDLLKKFGMLECKSISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLLYLT 235

Query: 362 ITRPDL 379
           +TRPD+
Sbjct: 236 LTRPDI 241


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  129 bits (324), Expect = 2e-28
 Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5    VKVTSSMYTILLLYVDDMILIGDNDAEISRLRDELSNRFEMKNLGETHSFLGLEILKTN- 181
            VK       I+L+YVDD+I+ GD+  EI R ++ LS RFEMK LG+   FLGLE+ +TN 
Sbjct: 965  VKANGGKLAIVLVYVDDLIITGDDVEEIFRTKENLSVRFEMKELGQLKHFLGLEVDRTNE 1024

Query: 182  GYFVSQGSYATSLLNRFGMADSTSISTPMEPQLKLQKIEGELLDDATKYRQLVGSLFYLT 361
            G F+ Q  YA  LL +FGM +   ISTPMEP  K+ + EG+ L DAT YRQLVGSL YLT
Sbjct: 1025 GIFLCQQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLLYLT 1084

Query: 362  ITRPDL 379
            +T PD+
Sbjct: 1085 LTXPDI 1090


>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/126 (53%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5    VKVTSSMYTILLLYVDDMILIGDNDAEISRLRDELSNRFEMKNLGETHSFLGLEILKTN- 181
            VK       I+L+YVDD+I+  D+  EI R  + LS RFEMK LG+   FLGLE+  T+ 
Sbjct: 638  VKANGGKLVIVLVYVDDLIITRDDVEEIFRTEENLSVRFEMKELGQLKHFLGLEVDCTHE 697

Query: 182  GYFVSQGSYATSLLNRFGMADSTSISTPMEPQLKLQKIEGELLDDATKYRQLVGSLFYLT 361
            G F+ Q  YA  LL +FGM +  SISTPMEP  K+ + EG+ L DAT YRQLVGSL YLT
Sbjct: 698  GIFLCQQKYAKDLLKKFGMLECKSISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLVYLT 757

Query: 362  ITRPDL 379
            +TRPD+
Sbjct: 758  LTRPDI 763


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/126 (44%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5    VKVTSSMYTILLLYVDDMILIGDNDAEISRLRDELSNRFEMKNLGETHSFLGLEILKTN- 181
            VK TS    ++ LYVDD+I+ G N  EI R ++E+ N FEM +LGE   FLG+E+ + + 
Sbjct: 1021 VKKTSKEILVVSLYVDDIIVTGSNVKEIERFKEEMKNEFEMTDLGELSYFLGMEVNQDDE 1080

Query: 182  GYFVSQGSYATSLLNRFGMADSTSISTPMEPQLKLQKIEGELLDDATKYRQLVGSLFYLT 361
            G F+SQ +YA  LL +FGM +  S+STP+ P  K++++  E L+D T YR ++G + YL 
Sbjct: 1081 GIFLSQENYAKKLLKKFGMQECKSVSTPLTPHGKIEEVLSEKLEDVTMYRSMIGGMLYLC 1140

Query: 362  ITRPDL 379
             +RPD+
Sbjct: 1141 ASRPDI 1146


>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = +2

Query: 8   KVTSSMYTILLLYVDDMILIGDNDAEISRLRDELSNRFEMKNLGETHSFLGLEIL-KTNG 184
           K ++ + TIL++YVDD+++ G+N  EIS L+  L + F +K+LGE   FLG+EIL + +G
Sbjct: 57  KGSAGLITILVVYVDDILITGNNHTEISALKSFLDSEFRIKDLGEVSYFLGMEILHEPDG 116

Query: 185 YFVSQGSYATSLLNRFGMADSTSISTPMEPQLKLQKIEGELLDDATKYRQLVGSLFYLTI 364
             V+Q  +A  LL+ +      +++TP++P LKL  I GELL D T YR+LVG L YLT 
Sbjct: 117 LIVTQRKFAMDLLSEYSSLSPRTVTTPLDPSLKLSSISGELLQDPTFYRRLVGKLNYLTH 176

Query: 365 TRPDL 379
           TRPD+
Sbjct: 177 TRPDI 181