BLASTX nr result

ID: Cimicifuga21_contig00037898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037898
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556925.1| PREDICTED: uncharacterized protein LOC100793...    54   3e-13
ref|XP_002528360.1| conserved hypothetical protein [Ricinus comm...    54   3e-13
ref|XP_003555500.1| PREDICTED: uncharacterized protein LOC100813...    51   3e-13
ref|XP_003535452.1| PREDICTED: uncharacterized protein LOC100803...    50   5e-13
emb|CAN83004.1| hypothetical protein VITISV_003698 [Vitis vinifera]    49   6e-12

>ref|XP_003556925.1| PREDICTED: uncharacterized protein LOC100793417 [Glycine max]
          Length = 432

 Score = 53.5 bits (127), Expect(2) = 3e-13
 Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
 Frame = +1

Query: 349 SIPLGLSQYQPFDLVVPFNGGVPLPLGFSEDCC--LPSYGILEPSSPSCSLIDPTMGQFL 522
           SI  GLS Y P D V+    G PLP  F +DC   +PSY  L PSSPSCS + P +G ++
Sbjct: 170 SILTGLSHY-PTDPVIAPLIGAPLPSVFDDDCISSIPSYVPLNPSSPSCSYLSPGIGVYM 228

Query: 523 --PGTLTT 540
             PG+L T
Sbjct: 229 PPPGSLNT 236



 Score = 46.2 bits (108), Expect(2) = 3e-13
 Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
 Frame = +2

Query: 32  FPETLQNSEVSSCSNYCYEDXXXXXXXXXXXXXXPSDV---EKFNSNIHXXXXXXXXXXX 202
           FP TLQNSEV+S SN C+E+              P DV    KFN N +           
Sbjct: 37  FPHTLQNSEVTSSSNCCHEEKSSYATTISP----PLDVVDNNKFNINSNSSNIVTTTSSS 92

Query: 203 XXXXXXXXXXXXXXYDPQN--------DNDNNDISASMNFLAQPTFPIPP--TITNQEDQ 352
                          +  N        D  +NDISAS++F + P+F +PP   I+ Q+DQ
Sbjct: 93  TTTTSTTTNNNNNATNGNNLSIFFDTQDEIDNDISASIDFSSSPSFVVPPLLPISTQQDQ 152


>ref|XP_002528360.1| conserved hypothetical protein [Ricinus communis]
           gi|223532228|gb|EEF34032.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score = 54.3 bits (129), Expect(2) = 3e-13
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = +1

Query: 361 GLSQYQPFDLVVPFNGGVPLPLGFSEDCC--LPSYGILEPSSPSCSLIDPTMGQFL--PG 528
           GL+QY P D + P   G PLP  F EDC   +PSY  L PSSPSCS + P +  ++   G
Sbjct: 180 GLTQY-PSDSIAPLLVGPPLPSVFEEDCLSSVPSYVTLNPSSPSCSFLGPAISTYMSTAG 238

Query: 529 TLTT 540
           T+T+
Sbjct: 239 TMTS 242



 Score = 45.4 bits (106), Expect(2) = 3e-13
 Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 24/139 (17%)
 Frame = +2

Query: 32  FPETLQNSEVSSCSNYCYEDXXXXXXXXXXXXXXPSDVEKFNS----------------- 160
           F ETLQNSEV+S SN CYE+              P D+EKFNS                 
Sbjct: 31  FLETLQNSEVTSSSNCCYEENSPYTTNLAL----PPDIEKFNSCQDNNCNNTSTTTPTTT 86

Query: 161 -------NIHXXXXXXXXXXXXXXXXXXXXXXXXXYDPQNDNDNNDISASMNFLAQPTFP 319
                                              +D Q++ DN +ISAS++F + PTF 
Sbjct: 87  STTTTATTTTSTTTTAAAHANNNISCSNNNNLSIIFDSQDELDN-EISASIDFSSSPTFS 145

Query: 320 IPPTITNQEDQSHWGFHNI 376
           IP  I   +    + F ++
Sbjct: 146 IPQFINTDQQDHQFDFSSV 164


>ref|XP_003555500.1| PREDICTED: uncharacterized protein LOC100813806 [Glycine max]
          Length = 417

 Score = 50.8 bits (120), Expect(2) = 3e-13
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
 Frame = +2

Query: 32  FPETLQNSEVSSCSNYCYEDXXXXXXXXXXXXXXPSDVE-KFNSNIHXXXXXXXXXXXXX 208
           FPE LQNSEV+S SN CYE+                DV+ K NSN +             
Sbjct: 42  FPEALQNSEVTSSSNCCYEENSSYATTNISVTV---DVDNKLNSNSNTVTTPTSTTTTNT 98

Query: 209 XXXXXXXXXXXXYDPQNDNDNNDISASMNFLAQPTFPIPPTITNQEDQSHWGFHNI 376
                       +    +  +NDISAS++F   P+F +PP +     Q  + F ++
Sbjct: 99  NNNTTNSSNLSIFFDSQEEIDNDISASIDFSLSPSFNVPPFLPVSSQQEQFDFSSV 154



 Score = 48.9 bits (115), Expect(2) = 3e-13
 Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
 Frame = +1

Query: 349 SIPLGLSQYQPFDLVVPFNGGVPLPLGFSEDC--CLPSYGILEPSSPSCSLIDPTMGQFL 522
           S+  G +QY P D V P   G PLP  F EDC   +PSY  L PSSP C+ + P M  ++
Sbjct: 164 SVVEGFTQY-PTDAVAPPFMGAPLPSVFEEDCISSVPSYMPLNPSSP-CTYLSPGMPPYM 221

Query: 523 P-GTLTT 540
           P G LTT
Sbjct: 222 PHGPLTT 228


>ref|XP_003535452.1| PREDICTED: uncharacterized protein LOC100803778 [Glycine max]
          Length = 406

 Score = 50.1 bits (118), Expect(2) = 5e-13
 Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
 Frame = +1

Query: 349 SIPLGLSQYQPFDLVVPFNGGVPLPLGFSEDC--CLPSYGILEPSSPSCSLIDPTMGQFL 522
           S+  G SQY P D V P   G PLP  F EDC   +PSY  L PSSP C+ + P M  ++
Sbjct: 154 SVVEGFSQY-PNDSVAPPFMGAPLPSVFEEDCISSVPSYMALNPSSP-CTYLSPGMPPYM 211

Query: 523 P-GTLTT 540
           P G LTT
Sbjct: 212 PHGPLTT 218



 Score = 48.9 bits (115), Expect(2) = 5e-13
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
 Frame = +2

Query: 32  FPETLQNSEVSSCSNYCYEDXXXXXXXXXXXXXXPSDVE-KFNSNIHXXXXXXXXXXXXX 208
           FPETL NSEV+S SN CYE+                DV+ K NSN +             
Sbjct: 32  FPETLPNSEVTSSSNCCYEENSSYATTNISVTV---DVDNKLNSNSNTVTTPTSTTTTNT 88

Query: 209 XXXXXXXXXXXXYDPQNDNDNNDISASMNFLAQPTFPIPPTITNQEDQSHWGFHNI 376
                            +  +NDISAS++F   P+F +PP +     Q  + F ++
Sbjct: 89  NNNTTNSSNLSIIFDSQEEIDNDISASIDFSLSPSFNVPPFLPATSQQEQFDFSSV 144


>emb|CAN83004.1| hypothetical protein VITISV_003698 [Vitis vinifera]
          Length = 455

 Score = 48.9 bits (115), Expect(2) = 6e-12
 Identities = 38/122 (31%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
 Frame = +2

Query: 29  VFPETLQNSEVSSCSNYCYEDXXXXXXXXXXXXXX--------------PSDVEKFNSNI 166
           +FPETLQ+S  +S SN C ED                            PSD+ KFNSN 
Sbjct: 34  LFPETLQSSGGTSSSNGCCEDNSSYPTTLPLPPEISKFTSNHETATLPLPSDINKFNSN- 92

Query: 167 HXXXXXXXXXXXXXXXXXXXXXXXXXYDPQNDNDNNDISASMNFLAQPTFPIPPTITNQE 346
           H                         +D Q + DN DISAS+ F   P F +PP    Q 
Sbjct: 93  HENNATTATTTSTTTTASNNSNLSIIFDSQEEIDN-DISASIGFSPSPPFSVPPFFNPQS 151

Query: 347 DQ 352
           +Q
Sbjct: 152 EQ 153



 Score = 46.6 bits (109), Expect(2) = 6e-12
 Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = +1

Query: 361 GLSQYQPFDLVVPFNGGVPLPLGFSEDCCL---PSYGILEPSSPSCSLIDP-TMGQFLPG 528
           GLSQY P     P   G PLP    E+C     P Y  L PSSPSCS I+P TMG +L G
Sbjct: 172 GLSQYPPDP--APALIGPPLPSVCEEECLSSIPPPYMRLNPSSPSCSFIEPATMGSYLLG 229

Query: 529 TLT 537
             T
Sbjct: 230 NFT 232


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