BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037842
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323677.1| predicted protein [Populus trichocarpa] gi|2...    55   2e-08
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    49   6e-08
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    49   6e-08
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]    53   4e-07

>ref|XP_002323677.1| predicted protein [Populus trichocarpa] gi|222868307|gb|EEF05438.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 25/67 (37%), Positives = 37/67 (55%)
 Frame = -2

Query: 301 LVETKLEGYALHWWKNYQKNRQLQGYPRTTLWASMKTDLMVEFLPPTYERGLSFRVMNLA 122
           +V  KL G A  +WK  +  R L G P    W  MK+  M +FLPP YE+ L  ++ N  
Sbjct: 167 VVANKLRGSAAAYWKYLKNKRVLDGKPPIATWEKMKSKFMSKFLPPDYEQRLYVQLQNCK 226

Query: 121 QGSKSTQ 101
           QG+++ +
Sbjct: 227 QGNRTVE 233



 Score = 28.5 bits (62), Expect(2) = 2e-08
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 411 DVSSFDGTKNPDLFIDWIDNIGTIF 337
           ++ +F GT+N D F  WID + T F
Sbjct: 130 EMPTFKGTQNVDEFFSWIDEVETGF 154


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 48.9 bits (115), Expect(2) = 6e-08
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = -2

Query: 307 VMLVETKLEGYALHWWKNYQKNRQLQGYPRTTLWASMKTDLMVEFLPPTYERGLSFRVMN 128
           V L   +   YA  WWK   ++R  +  P    WA MK  +   F+P  ++R L  R+  
Sbjct: 155 VKLAVVEFSDYAASWWKKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQR 214

Query: 127 LAQGSKS 107
           L QGS S
Sbjct: 215 LKQGSMS 221



 Score = 32.7 bits (73), Expect(2) = 6e-08
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 408 VSSFDGTKNPDLFIDWIDNIGTIF 337
           +SSF GT++PDL++DW   +  IF
Sbjct: 121 MSSFKGTRDPDLYLDWERRVEAIF 144


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 48.9 bits (115), Expect(2) = 6e-08
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = -2

Query: 307 VMLVETKLEGYALHWWKNYQKNRQLQGYPRTTLWASMKTDLMVEFLPPTYERGLSFRVMN 128
           V L   +   YA  WWK   ++R  +  P    WA MK  +   F+P  ++R L  R+  
Sbjct: 155 VKLAVVEFSDYAASWWKKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQR 214

Query: 127 LAQGSKS 107
           L QGS S
Sbjct: 215 LKQGSMS 221



 Score = 32.7 bits (73), Expect(2) = 6e-08
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 408 VSSFDGTKNPDLFIDWIDNIGTIF 337
           +SSF GT++PDL++DW   +  IF
Sbjct: 121 MSSFKGTRDPDLYLDWERRVEAIF 144


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/75 (42%), Positives = 42/75 (56%)
 Frame = -2

Query: 307 VMLVETKLEGYALHWWKNYQKNRQLQGYPRTTLWASMKTDLMVEFLPPTYERGLSFRVMN 128
           V LV T+L G A  WW+  +K R LQG  + T W  MK ++   FLP  Y R L  R+ N
Sbjct: 125 VALVATRLRGRAGAWWQQVKKTRTLQGKGKITCWDKMKKNMRSAFLPYNYTRTLYQRLQN 184

Query: 127 LAQGSKSTQMNSTCF 83
           L QG++S    +T F
Sbjct: 185 LRQGNRSVDDYTTEF 199


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score = 53.1 bits (126), Expect(2) = 4e-07
 Identities = 27/82 (32%), Positives = 40/82 (48%)
 Frame = -2

Query: 307 VMLVETKLEGYALHWWKNYQKNRQLQGYPRTTLWASMKTDLMVEFLPPTYERGLSFRVMN 128
           V  V+ KL+G A  WW N +      G P    W  MK  +   FLP  YE+ +  ++ +
Sbjct: 136 VRFVKAKLKGAARLWWHNIENQAHRTGQPPIDTWDEMKLKMKEHFLPTDYEQLMYTKLFS 195

Query: 127 LAQGSKSTQMNSTCFRGFLIVR 62
           L QG+KS +  +  F   L +R
Sbjct: 196 LKQGTKSVEEYTEEFHELLSIR 217



 Score = 25.4 bits (54), Expect(2) = 4e-07
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 411 DVSSFDGTKNPDLFIDWIDNIGTIF 337
           +V+ F G  NP  F+DWI ++   F
Sbjct: 101 EVAEFYGKLNPTAFLDWIMSMEDYF 125