BLASTX nr result

ID: Cimicifuga21_contig00037833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00037833
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001130722.1| uncharacterized protein LOC100191826 [Zea ma...   143   1e-32
gb|AFW79700.1| 50S ribosomal protein L3-2 [Zea mays]                  143   2e-32
gb|ACF79058.1| unknown [Zea mays]                                     143   2e-32
gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indi...   142   3e-32
ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group] g...   142   3e-32

>ref|NP_001130722.1| uncharacterized protein LOC100191826 [Zea mays]
           gi|195627984|gb|ACG35822.1| 50S ribosomal protein L3-2
           [Zea mays]
          Length = 318

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/85 (80%), Positives = 73/85 (85%)
 Frame = -3

Query: 257 EKHLTKPEVGHFRGQDVPMKRKLREFPVTPDALIPLGTPITVRHFVPGQFVDVTGITKGK 78
           EKHLTKPEVGHFR Q VP+KRKLREFPVT DAL+P+GT ITVRHFVPGQFVDVTGITKGK
Sbjct: 127 EKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSITVRHFVPGQFVDVTGITKGK 186

Query: 77  GFQGPVKRWNFHGEGASHGTSKTHR 3
           GF G +KR+ F G  ASHGTS  HR
Sbjct: 187 GFAGVMKRYGFGGXPASHGTSLAHR 211


>gb|AFW79700.1| 50S ribosomal protein L3-2 [Zea mays]
          Length = 318

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/85 (80%), Positives = 73/85 (85%)
 Frame = -3

Query: 257 EKHLTKPEVGHFRGQDVPMKRKLREFPVTPDALIPLGTPITVRHFVPGQFVDVTGITKGK 78
           EKHLTKPEVGHFR Q VP+KRKLREFPVT DAL+P+GT ITVRHFVPGQFVDVTGITKGK
Sbjct: 127 EKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSITVRHFVPGQFVDVTGITKGK 186

Query: 77  GFQGPVKRWNFHGEGASHGTSKTHR 3
           GF G +KR+ F G  ASHGTS  HR
Sbjct: 187 GFAGVMKRYGFGGMPASHGTSLAHR 211


>gb|ACF79058.1| unknown [Zea mays]
          Length = 254

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/85 (80%), Positives = 73/85 (85%)
 Frame = -3

Query: 257 EKHLTKPEVGHFRGQDVPMKRKLREFPVTPDALIPLGTPITVRHFVPGQFVDVTGITKGK 78
           EKHLTKPEVGHFR Q VP+KRKLREFPVT DAL+P+GT ITVRHFVPGQFVDVTGITKGK
Sbjct: 63  EKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSITVRHFVPGQFVDVTGITKGK 122

Query: 77  GFQGPVKRWNFHGEGASHGTSKTHR 3
           GF G +KR+ F G  ASHGTS  HR
Sbjct: 123 GFAGVMKRYGFGGMPASHGTSLAHR 147


>gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group]
          Length = 319

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/85 (81%), Positives = 72/85 (84%)
 Frame = -3

Query: 257 EKHLTKPEVGHFRGQDVPMKRKLREFPVTPDALIPLGTPITVRHFVPGQFVDVTGITKGK 78
           EKHLTKPEVGHFR Q VP+KRKLREFPVT DALIPLGT ITVRHFVPGQFVDVTGITKGK
Sbjct: 130 EKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALIPLGTTITVRHFVPGQFVDVTGITKGK 189

Query: 77  GFQGPVKRWNFHGEGASHGTSKTHR 3
           GF G +KR  F G  ASHG S +HR
Sbjct: 190 GFAGGMKRHGFSGMPASHGASLSHR 214


>ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group]
           gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3
           [Oryza sativa Japonica Group]
           gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa
           Japonica Group] gi|215678787|dbj|BAG95224.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215707174|dbj|BAG93634.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618109|gb|EEE54241.1| hypothetical protein
           OsJ_01115 [Oryza sativa Japonica Group]
          Length = 319

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/85 (81%), Positives = 72/85 (84%)
 Frame = -3

Query: 257 EKHLTKPEVGHFRGQDVPMKRKLREFPVTPDALIPLGTPITVRHFVPGQFVDVTGITKGK 78
           EKHLTKPEVGHFR Q VP+KRKLREFPVT DALIPLGT ITVRHFVPGQFVDVTGITKGK
Sbjct: 130 EKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALIPLGTTITVRHFVPGQFVDVTGITKGK 189

Query: 77  GFQGPVKRWNFHGEGASHGTSKTHR 3
           GF G +KR  F G  ASHG S +HR
Sbjct: 190 GFAGGMKRHGFSGMPASHGASLSHR 214


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